Gene : Bostr.18813s0002 B. stricta v1.2
Defline:  (1 of 3) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  2
Name:  ? Bostr.18813s0002 Secondary Identifier:  ? PAC:30664548
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3561 Boechera stricta pathologic  
Bstricta PWY3O-450 Boechera stricta pathologic  
Bstricta PWY4FS-2 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18813s0002 0.5kb upstream 0.5kb upstream 3532 true Scaffold18813: 11017-14548 Boechera stricta
Bostr.18813s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold18813: 11017-11516 Boechera stricta
Bostr.18813s0002 0.5kb downstream 0.5kb downstream 3532 true Scaffold18813: 11517-15048 Boechera stricta
Bostr.18813s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold18813: 14549-15048 Boechera stricta
Bostr.18813s0002 1.0kb upstream 1.0kb upstream 4032 true Scaffold18813: 10517-14548 Boechera stricta
Bostr.18813s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold18813: 10517-11516 Boechera stricta
Bostr.18813s0002 1.0kb downstream 1.0kb downstream 4032 true Scaffold18813: 11517-15548 Boechera stricta
Bostr.18813s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold18813: 14549-15548 Boechera stricta
Bostr.18813s0002 2.0kb upstream 2.0kb upstream 5032 true Scaffold18813: 9517-14548 Boechera stricta
Bostr.18813s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold18813: 9517-11516 Boechera stricta
Bostr.18813s0002 2.0kb downstream 2.0kb downstream 5032 true Scaffold18813: 11517-16548 Boechera stricta
Bostr.18813s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold18813: 14549-16548 Boechera stricta
Bostr.18813s0002 5.0kb upstream 5.0kb upstream 8032 true Scaffold18813: 6517-14548 Boechera stricta
Bostr.18813s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold18813: 6517-11516 Boechera stricta
Bostr.18813s0002 5.0kb downstream 5.0kb downstream 8032 true Scaffold18813: 11517-19548 Boechera stricta
Bostr.18813s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold18813: 14549-19548 Boechera stricta
Bostr.18813s0002 10.0kb upstream 10.0kb upstream 13032 true Scaffold18813: 1517-14548 Boechera stricta
Bostr.18813s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold18813: 1517-11516 Boechera stricta
Bostr.18813s0002 10.0kb downstream 10.0kb downstream 12793 true Scaffold18813: 11517-24309 Boechera stricta
Bostr.18813s0002 10.0kb downstream 10.0kb downstream 9761 false Scaffold18813: 14549-24309 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370712 5261 Brassicaceae View MSA
123838726 5264 Brassicales-Malvales View MSA
124345144 5266 SBM View MSA
124245941 5268 Malvidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain