Gene : Bostr.18473s0307 B. stricta v1.2
Defline:  (1 of 2) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  307
Name:  ? Bostr.18473s0307 Secondary Identifier:  ? PAC:30666835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0307 0.5kb upstream 0.5kb upstream 3757 true Scaffold18473: 1682496-1686252 Boechera stricta
Bostr.18473s0307 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 1682496-1682995 Boechera stricta
Bostr.18473s0307 0.5kb downstream 0.5kb downstream 3757 true Scaffold18473: 1682996-1686752 Boechera stricta
Bostr.18473s0307 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 1686253-1686752 Boechera stricta
Bostr.18473s0307 1.0kb upstream 1.0kb upstream 4257 true Scaffold18473: 1681996-1686252 Boechera stricta
Bostr.18473s0307 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 1681996-1682995 Boechera stricta
Bostr.18473s0307 1.0kb downstream 1.0kb downstream 4257 true Scaffold18473: 1682996-1687252 Boechera stricta
Bostr.18473s0307 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 1686253-1687252 Boechera stricta
Bostr.18473s0307 2.0kb upstream 2.0kb upstream 5257 true Scaffold18473: 1680996-1686252 Boechera stricta
Bostr.18473s0307 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 1680996-1682995 Boechera stricta
Bostr.18473s0307 2.0kb downstream 2.0kb downstream 5257 true Scaffold18473: 1682996-1688252 Boechera stricta
Bostr.18473s0307 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 1686253-1688252 Boechera stricta
Bostr.18473s0307 5.0kb upstream 5.0kb upstream 8257 true Scaffold18473: 1677996-1686252 Boechera stricta
Bostr.18473s0307 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 1677996-1682995 Boechera stricta
Bostr.18473s0307 5.0kb downstream 5.0kb downstream 8257 true Scaffold18473: 1682996-1691252 Boechera stricta
Bostr.18473s0307 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 1686253-1691252 Boechera stricta
Bostr.18473s0307 10.0kb upstream 10.0kb upstream 13257 true Scaffold18473: 1672996-1686252 Boechera stricta
Bostr.18473s0307 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 1672996-1682995 Boechera stricta
Bostr.18473s0307 10.0kb downstream 10.0kb downstream 13257 true Scaffold18473: 1682996-1696252 Boechera stricta
Bostr.18473s0307 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 1686253-1696252 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
122365315 5261 Brassicaceae View MSA
123827412 5264 Brassicales-Malvales View MSA
124342810 5266 SBM View MSA
124240381 5268 Malvidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain