Gene : Bostr.19427s0004 B. stricta v1.2
Defline:  (1 of 2) PTHR10992//PTHR10992:SF792 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  4
Name:  ? Bostr.19427s0004 Secondary Identifier:  ? PAC:30678895
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPAS-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19427s0004 0.5kb upstream 0.5kb upstream 2138 true Scaffold19427: 36326-38463 Boechera stricta
Bostr.19427s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold19427: 36326-36825 Boechera stricta
Bostr.19427s0004 0.5kb downstream 0.5kb downstream 2138 true Scaffold19427: 36826-38963 Boechera stricta
Bostr.19427s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold19427: 38464-38963 Boechera stricta
Bostr.19427s0004 1.0kb upstream 1.0kb upstream 2638 true Scaffold19427: 35826-38463 Boechera stricta
Bostr.19427s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold19427: 35826-36825 Boechera stricta
Bostr.19427s0004 1.0kb downstream 1.0kb downstream 2638 true Scaffold19427: 36826-39463 Boechera stricta
Bostr.19427s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold19427: 38464-39463 Boechera stricta
Bostr.19427s0004 2.0kb upstream 2.0kb upstream 3638 true Scaffold19427: 34826-38463 Boechera stricta
Bostr.19427s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold19427: 34826-36825 Boechera stricta
Bostr.19427s0004 2.0kb downstream 2.0kb downstream 3638 true Scaffold19427: 36826-40463 Boechera stricta
Bostr.19427s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold19427: 38464-40463 Boechera stricta
Bostr.19427s0004 5.0kb upstream 5.0kb upstream 6638 true Scaffold19427: 31826-38463 Boechera stricta
Bostr.19427s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold19427: 31826-36825 Boechera stricta
Bostr.19427s0004 5.0kb downstream 5.0kb downstream 6638 true Scaffold19427: 36826-43463 Boechera stricta
Bostr.19427s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold19427: 38464-43463 Boechera stricta
Bostr.19427s0004 10.0kb upstream 10.0kb upstream 11638 true Scaffold19427: 26826-38463 Boechera stricta
Bostr.19427s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold19427: 26826-36825 Boechera stricta
Bostr.19427s0004 10.0kb downstream 10.0kb downstream 11638 true Scaffold19427: 36826-48463 Boechera stricta
Bostr.19427s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold19427: 38464-48463 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122342690 5261 Brassicaceae Singleton cluster - no MSA
123841298 5264 Brassicales-Malvales View MSA
124342133 5266 SBM View MSA
124239723 5268 Malvidae View MSA
124070444 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain