Gene : Bostr.19427s0034 B. stricta v1.2

Defline:  (1 of 1) K05752 - chromosome 3 open reading frame 10 Genomic Order:  34
Name:  ? Bostr.19427s0034 Secondary Identifier:  ? PAC:30678942

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19427s0034 0.5kb upstream 0.5kb upstream 1678 true Scaffold19427: 277314-278991 Boechera stricta
Bostr.19427s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold19427: 277314-277813 Boechera stricta
Bostr.19427s0034 0.5kb downstream 0.5kb downstream 1678 true Scaffold19427: 277814-279491 Boechera stricta
Bostr.19427s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold19427: 278992-279491 Boechera stricta
Bostr.19427s0034 1.0kb upstream 1.0kb upstream 2178 true Scaffold19427: 276814-278991 Boechera stricta
Bostr.19427s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold19427: 276814-277813 Boechera stricta
Bostr.19427s0034 1.0kb downstream 1.0kb downstream 2178 true Scaffold19427: 277814-279991 Boechera stricta
Bostr.19427s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold19427: 278992-279991 Boechera stricta
Bostr.19427s0034 2.0kb upstream 2.0kb upstream 3178 true Scaffold19427: 275814-278991 Boechera stricta
Bostr.19427s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold19427: 275814-277813 Boechera stricta
Bostr.19427s0034 2.0kb downstream 2.0kb downstream 3178 true Scaffold19427: 277814-280991 Boechera stricta
Bostr.19427s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold19427: 278992-280991 Boechera stricta
Bostr.19427s0034 5.0kb upstream 5.0kb upstream 6178 true Scaffold19427: 272814-278991 Boechera stricta
Bostr.19427s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold19427: 272814-277813 Boechera stricta
Bostr.19427s0034 5.0kb downstream 5.0kb downstream 6178 true Scaffold19427: 277814-283991 Boechera stricta
Bostr.19427s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold19427: 278992-283991 Boechera stricta
Bostr.19427s0034 10.0kb upstream 10.0kb upstream 11178 true Scaffold19427: 267814-278991 Boechera stricta
Bostr.19427s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold19427: 267814-277813 Boechera stricta
Bostr.19427s0034 10.0kb downstream 10.0kb downstream 11178 true Scaffold19427: 277814-288991 Boechera stricta
Bostr.19427s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold19427: 278992-288991 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372958 5261 Brassicaceae View MSA
123839904 5264 Brassicales-Malvales View MSA
124341122 5266 SBM View MSA
124247495 5268 Malvidae View MSA
124051100 5270 Rosid View MSA
123747984 5271 Pentapetalae View MSA
122786023 5272 Eudicot View MSA
122047228 5273 Angiosperm View MSA
121347694 5274 Embryophyte View MSA
123380603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain