Gene : Bostr.19427s0061 B. stricta v1.2
Defline:  (1 of 2) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  61
Name:  ? Bostr.19427s0061 Secondary Identifier:  ? PAC:30678913
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19427s0061 0.5kb upstream 0.5kb upstream 3260 true Scaffold19427: 541116-544375 Boechera stricta
Bostr.19427s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold19427: 543876-544375 Boechera stricta
Bostr.19427s0061 0.5kb downstream 0.5kb downstream 3260 true Scaffold19427: 540616-543875 Boechera stricta
Bostr.19427s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold19427: 540616-541115 Boechera stricta
Bostr.19427s0061 1.0kb upstream 1.0kb upstream 3760 true Scaffold19427: 541116-544875 Boechera stricta
Bostr.19427s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold19427: 543876-544875 Boechera stricta
Bostr.19427s0061 1.0kb downstream 1.0kb downstream 3760 true Scaffold19427: 540116-543875 Boechera stricta
Bostr.19427s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold19427: 540116-541115 Boechera stricta
Bostr.19427s0061 2.0kb upstream 2.0kb upstream 4760 true Scaffold19427: 541116-545875 Boechera stricta
Bostr.19427s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold19427: 543876-545875 Boechera stricta
Bostr.19427s0061 2.0kb downstream 2.0kb downstream 4760 true Scaffold19427: 539116-543875 Boechera stricta
Bostr.19427s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold19427: 539116-541115 Boechera stricta
Bostr.19427s0061 5.0kb upstream 5.0kb upstream 7760 true Scaffold19427: 541116-548875 Boechera stricta
Bostr.19427s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold19427: 543876-548875 Boechera stricta
Bostr.19427s0061 5.0kb downstream 5.0kb downstream 7760 true Scaffold19427: 536116-543875 Boechera stricta
Bostr.19427s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold19427: 536116-541115 Boechera stricta
Bostr.19427s0061 10.0kb upstream 10.0kb upstream 12760 true Scaffold19427: 541116-553875 Boechera stricta
Bostr.19427s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold19427: 543876-553875 Boechera stricta
Bostr.19427s0061 10.0kb downstream 10.0kb downstream 12760 true Scaffold19427: 531116-543875 Boechera stricta
Bostr.19427s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold19427: 531116-541115 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122378739 5261 Brassicaceae View MSA
123827372 5264 Brassicales-Malvales View MSA
124337497 5266 SBM View MSA
124238551 5268 Malvidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain