Gene : Bostr.19427s0052 B. stricta v1.2
Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  52
Name:  ? Bostr.19427s0052 Secondary Identifier:  ? PAC:30678902
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ETHYL-PWY Boechera stricta pathologic  
Bstricta PWY-7270 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19427s0052 0.5kb upstream 0.5kb upstream 2338 true Scaffold19427: 473955-476292 Boechera stricta
Bostr.19427s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold19427: 475793-476292 Boechera stricta
Bostr.19427s0052 0.5kb downstream 0.5kb downstream 2338 true Scaffold19427: 473455-475792 Boechera stricta
Bostr.19427s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold19427: 473455-473954 Boechera stricta
Bostr.19427s0052 1.0kb upstream 1.0kb upstream 2838 true Scaffold19427: 473955-476792 Boechera stricta
Bostr.19427s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold19427: 475793-476792 Boechera stricta
Bostr.19427s0052 1.0kb downstream 1.0kb downstream 2838 true Scaffold19427: 472955-475792 Boechera stricta
Bostr.19427s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold19427: 472955-473954 Boechera stricta
Bostr.19427s0052 2.0kb upstream 2.0kb upstream 3838 true Scaffold19427: 473955-477792 Boechera stricta
Bostr.19427s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold19427: 475793-477792 Boechera stricta
Bostr.19427s0052 2.0kb downstream 2.0kb downstream 3838 true Scaffold19427: 471955-475792 Boechera stricta
Bostr.19427s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold19427: 471955-473954 Boechera stricta
Bostr.19427s0052 5.0kb upstream 5.0kb upstream 6838 true Scaffold19427: 473955-480792 Boechera stricta
Bostr.19427s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold19427: 475793-480792 Boechera stricta
Bostr.19427s0052 5.0kb downstream 5.0kb downstream 6838 true Scaffold19427: 468955-475792 Boechera stricta
Bostr.19427s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold19427: 468955-473954 Boechera stricta
Bostr.19427s0052 10.0kb upstream 10.0kb upstream 11838 true Scaffold19427: 473955-485792 Boechera stricta
Bostr.19427s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold19427: 475793-485792 Boechera stricta
Bostr.19427s0052 10.0kb downstream 10.0kb downstream 11838 true Scaffold19427: 463955-475792 Boechera stricta
Bostr.19427s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold19427: 463955-473954 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365167 5261 Brassicaceae View MSA
123798904 5264 Brassicales-Malvales View MSA
124296479 5266 SBM View MSA
124148617 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain