Gene : Bostr.19424s1088 B. stricta v1.2

Defline:  (1 of 2) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  1088
Name:  ? Bostr.19424s1088 Secondary Identifier:  ? PAC:30661326

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s1088 0.5kb upstream 0.5kb upstream 8027 true Scaffold19424: 7489368-7497394 Boechera stricta
Bostr.19424s1088 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 7489368-7489867 Boechera stricta
Bostr.19424s1088 0.5kb downstream 0.5kb downstream 8027 true Scaffold19424: 7489868-7497894 Boechera stricta
Bostr.19424s1088 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 7497395-7497894 Boechera stricta
Bostr.19424s1088 1.0kb upstream 1.0kb upstream 8527 true Scaffold19424: 7488868-7497394 Boechera stricta
Bostr.19424s1088 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 7488868-7489867 Boechera stricta
Bostr.19424s1088 1.0kb downstream 1.0kb downstream 8527 true Scaffold19424: 7489868-7498394 Boechera stricta
Bostr.19424s1088 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 7497395-7498394 Boechera stricta
Bostr.19424s1088 2.0kb upstream 2.0kb upstream 9527 true Scaffold19424: 7487868-7497394 Boechera stricta
Bostr.19424s1088 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 7487868-7489867 Boechera stricta
Bostr.19424s1088 2.0kb downstream 2.0kb downstream 9527 true Scaffold19424: 7489868-7499394 Boechera stricta
Bostr.19424s1088 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 7497395-7499394 Boechera stricta
Bostr.19424s1088 5.0kb upstream 5.0kb upstream 12527 true Scaffold19424: 7484868-7497394 Boechera stricta
Bostr.19424s1088 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 7484868-7489867 Boechera stricta
Bostr.19424s1088 5.0kb downstream 5.0kb downstream 12527 true Scaffold19424: 7489868-7502394 Boechera stricta
Bostr.19424s1088 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 7497395-7502394 Boechera stricta
Bostr.19424s1088 10.0kb upstream 10.0kb upstream 17527 true Scaffold19424: 7479868-7497394 Boechera stricta
Bostr.19424s1088 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 7479868-7489867 Boechera stricta
Bostr.19424s1088 10.0kb downstream 10.0kb downstream 17527 true Scaffold19424: 7489868-7507394 Boechera stricta
Bostr.19424s1088 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 7497395-7507394 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379038 5261 Brassicaceae View MSA
123837098 5264 Brassicales-Malvales View MSA
124338859 5266 SBM View MSA
124237079 5268 Malvidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain