Gene : Bostr.19424s1089 B. stricta v1.2

Defline:  (1 of 2) PTHR32285:SF53 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 8-RELATED Genomic Order:  1089
Name:  ? Bostr.19424s1089 Secondary Identifier:  ? PAC:30661070

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s1089 0.5kb upstream 0.5kb upstream 2304 true Scaffold19424: 7497116-7499419 Boechera stricta
Bostr.19424s1089 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 7498920-7499419 Boechera stricta
Bostr.19424s1089 0.5kb downstream 0.5kb downstream 2304 true Scaffold19424: 7496616-7498919 Boechera stricta
Bostr.19424s1089 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 7496616-7497115 Boechera stricta
Bostr.19424s1089 1.0kb upstream 1.0kb upstream 2804 true Scaffold19424: 7497116-7499919 Boechera stricta
Bostr.19424s1089 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 7498920-7499919 Boechera stricta
Bostr.19424s1089 1.0kb downstream 1.0kb downstream 2804 true Scaffold19424: 7496116-7498919 Boechera stricta
Bostr.19424s1089 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 7496116-7497115 Boechera stricta
Bostr.19424s1089 2.0kb upstream 2.0kb upstream 3804 true Scaffold19424: 7497116-7500919 Boechera stricta
Bostr.19424s1089 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 7498920-7500919 Boechera stricta
Bostr.19424s1089 2.0kb downstream 2.0kb downstream 3804 true Scaffold19424: 7495116-7498919 Boechera stricta
Bostr.19424s1089 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 7495116-7497115 Boechera stricta
Bostr.19424s1089 5.0kb upstream 5.0kb upstream 6804 true Scaffold19424: 7497116-7503919 Boechera stricta
Bostr.19424s1089 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 7498920-7503919 Boechera stricta
Bostr.19424s1089 5.0kb downstream 5.0kb downstream 6804 true Scaffold19424: 7492116-7498919 Boechera stricta
Bostr.19424s1089 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 7492116-7497115 Boechera stricta
Bostr.19424s1089 10.0kb upstream 10.0kb upstream 11804 true Scaffold19424: 7497116-7508919 Boechera stricta
Bostr.19424s1089 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 7498920-7508919 Boechera stricta
Bostr.19424s1089 10.0kb downstream 10.0kb downstream 11804 true Scaffold19424: 7487116-7498919 Boechera stricta
Bostr.19424s1089 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 7487116-7497115 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378788 5261 Brassicaceae View MSA
123839977 5264 Brassicales-Malvales View MSA
124336444 5266 SBM View MSA
124237220 5268 Malvidae View MSA
124060600 5270 Rosid View MSA
123745624 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain