Gene : Bostr.19424s1090 B. stricta v1.2

Defline:  (1 of 3) PTHR31140:SF2 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VAL3 Genomic Order:  1090
Name:  ? Bostr.19424s1090 Secondary Identifier:  ? PAC:30661135

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s1090 0.5kb upstream 0.5kb upstream 3046 true Scaffold19424: 7501658-7504703 Boechera stricta
Bostr.19424s1090 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 7504204-7504703 Boechera stricta
Bostr.19424s1090 0.5kb downstream 0.5kb downstream 3046 true Scaffold19424: 7501158-7504203 Boechera stricta
Bostr.19424s1090 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 7501158-7501657 Boechera stricta
Bostr.19424s1090 1.0kb upstream 1.0kb upstream 3546 true Scaffold19424: 7501658-7505203 Boechera stricta
Bostr.19424s1090 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 7504204-7505203 Boechera stricta
Bostr.19424s1090 1.0kb downstream 1.0kb downstream 3546 true Scaffold19424: 7500658-7504203 Boechera stricta
Bostr.19424s1090 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 7500658-7501657 Boechera stricta
Bostr.19424s1090 2.0kb upstream 2.0kb upstream 4546 true Scaffold19424: 7501658-7506203 Boechera stricta
Bostr.19424s1090 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 7504204-7506203 Boechera stricta
Bostr.19424s1090 2.0kb downstream 2.0kb downstream 4546 true Scaffold19424: 7499658-7504203 Boechera stricta
Bostr.19424s1090 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 7499658-7501657 Boechera stricta
Bostr.19424s1090 5.0kb upstream 5.0kb upstream 7546 true Scaffold19424: 7501658-7509203 Boechera stricta
Bostr.19424s1090 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 7504204-7509203 Boechera stricta
Bostr.19424s1090 5.0kb downstream 5.0kb downstream 7546 true Scaffold19424: 7496658-7504203 Boechera stricta
Bostr.19424s1090 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 7496658-7501657 Boechera stricta
Bostr.19424s1090 10.0kb upstream 10.0kb upstream 12546 true Scaffold19424: 7501658-7514203 Boechera stricta
Bostr.19424s1090 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 7504204-7514203 Boechera stricta
Bostr.19424s1090 10.0kb downstream 10.0kb downstream 12546 true Scaffold19424: 7491658-7504203 Boechera stricta
Bostr.19424s1090 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 7491658-7501657 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365755 5261 Brassicaceae View MSA
123841427 5264 Brassicales-Malvales View MSA
124349842 5266 SBM View MSA
124251468 5268 Malvidae View MSA
124063141 5270 Rosid View MSA
123743640 5271 Pentapetalae View MSA
122794380 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain