Gene : Bostr.19424s1019 B. stricta v1.2
Defline:  (1 of 2) PTHR11404:SF6 - SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  1019
Name:  ? Bostr.19424s1019 Secondary Identifier:  ? PAC:30661104
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta DETOX1-PWY Boechera stricta pathologic  
Bstricta DETOX1-PWY-1 Boechera stricta pathologic  
Bstricta PWY-6854 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s1019 0.5kb upstream 0.5kb upstream 2301 true Scaffold19424: 7107328-7109628 Boechera stricta
Bostr.19424s1019 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 7107328-7107827 Boechera stricta
Bostr.19424s1019 0.5kb downstream 0.5kb downstream 2301 true Scaffold19424: 7107828-7110128 Boechera stricta
Bostr.19424s1019 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 7109629-7110128 Boechera stricta
Bostr.19424s1019 1.0kb upstream 1.0kb upstream 2801 true Scaffold19424: 7106828-7109628 Boechera stricta
Bostr.19424s1019 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 7106828-7107827 Boechera stricta
Bostr.19424s1019 1.0kb downstream 1.0kb downstream 2801 true Scaffold19424: 7107828-7110628 Boechera stricta
Bostr.19424s1019 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 7109629-7110628 Boechera stricta
Bostr.19424s1019 2.0kb upstream 2.0kb upstream 3801 true Scaffold19424: 7105828-7109628 Boechera stricta
Bostr.19424s1019 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 7105828-7107827 Boechera stricta
Bostr.19424s1019 2.0kb downstream 2.0kb downstream 3801 true Scaffold19424: 7107828-7111628 Boechera stricta
Bostr.19424s1019 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 7109629-7111628 Boechera stricta
Bostr.19424s1019 5.0kb upstream 5.0kb upstream 6801 true Scaffold19424: 7102828-7109628 Boechera stricta
Bostr.19424s1019 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 7102828-7107827 Boechera stricta
Bostr.19424s1019 5.0kb downstream 5.0kb downstream 6801 true Scaffold19424: 7107828-7114628 Boechera stricta
Bostr.19424s1019 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 7109629-7114628 Boechera stricta
Bostr.19424s1019 10.0kb upstream 10.0kb upstream 11801 true Scaffold19424: 7097828-7109628 Boechera stricta
Bostr.19424s1019 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 7097828-7107827 Boechera stricta
Bostr.19424s1019 10.0kb downstream 10.0kb downstream 11801 true Scaffold19424: 7107828-7119628 Boechera stricta
Bostr.19424s1019 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 7109629-7119628 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377659 5261 Brassicaceae View MSA
123838385 5264 Brassicales-Malvales View MSA
124322443 5266 SBM View MSA
124240779 5268 Malvidae View MSA
124073146 5270 Rosid View MSA
123736738 5271 Pentapetalae View MSA
122792658 5272 Eudicot View MSA
122050195 5273 Angiosperm View MSA
121345064 5274 Embryophyte View MSA
123426666 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain