Gene : Bostr.19424s0855 B. stricta v1.2
Defline:  (1 of 4) 6.3.5.5 - Carbamoyl-phosphate synthase (glutamine-hydrolyzing) / Glutamine-dependent carbamyl phosphate synthetase Genomic Order:  855
Name:  ? Bostr.19424s0855 Secondary Identifier:  ? PAC:30661906
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Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSYNBSUB-PWY Boechera stricta pathologic  
Bstricta ARGSYN-PWY Boechera stricta pathologic  
Bstricta CITRULBIO-PWY Boechera stricta pathologic  
Bstricta GLUTAMINDEG-PWY Boechera stricta pathologic  
Bstricta PWY0-162 Boechera stricta pathologic  
Bstricta PWY-4984 Boechera stricta pathologic  
Bstricta PWY-5686 Boechera stricta pathologic  
Bstricta PWY-7211 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0855 0.5kb upstream 0.5kb upstream 3768 true Scaffold19424: 6295496-6299263 Boechera stricta
Bostr.19424s0855 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 6298764-6299263 Boechera stricta
Bostr.19424s0855 0.5kb downstream 0.5kb downstream 3768 true Scaffold19424: 6294996-6298763 Boechera stricta
Bostr.19424s0855 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 6294996-6295495 Boechera stricta
Bostr.19424s0855 1.0kb upstream 1.0kb upstream 4268 true Scaffold19424: 6295496-6299763 Boechera stricta
Bostr.19424s0855 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 6298764-6299763 Boechera stricta
Bostr.19424s0855 1.0kb downstream 1.0kb downstream 4268 true Scaffold19424: 6294496-6298763 Boechera stricta
Bostr.19424s0855 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 6294496-6295495 Boechera stricta
Bostr.19424s0855 2.0kb upstream 2.0kb upstream 5268 true Scaffold19424: 6295496-6300763 Boechera stricta
Bostr.19424s0855 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 6298764-6300763 Boechera stricta
Bostr.19424s0855 2.0kb downstream 2.0kb downstream 5268 true Scaffold19424: 6293496-6298763 Boechera stricta
Bostr.19424s0855 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 6293496-6295495 Boechera stricta
Bostr.19424s0855 5.0kb upstream 5.0kb upstream 8268 true Scaffold19424: 6295496-6303763 Boechera stricta
Bostr.19424s0855 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 6298764-6303763 Boechera stricta
Bostr.19424s0855 5.0kb downstream 5.0kb downstream 8268 true Scaffold19424: 6290496-6298763 Boechera stricta
Bostr.19424s0855 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 6290496-6295495 Boechera stricta
Bostr.19424s0855 10.0kb upstream 10.0kb upstream 13268 true Scaffold19424: 6295496-6308763 Boechera stricta
Bostr.19424s0855 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 6298764-6308763 Boechera stricta
Bostr.19424s0855 10.0kb downstream 10.0kb downstream 13268 true Scaffold19424: 6285496-6298763 Boechera stricta
Bostr.19424s0855 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 6285496-6295495 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122340278 5261 Brassicaceae Singleton cluster - no MSA
123780724 5264 Brassicales-Malvales Singleton cluster - no MSA
124279024 5266 SBM Singleton cluster - no MSA
124252256 5268 Malvidae View MSA
124069141 5270 Rosid View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain