Gene : Bostr.19424s0888 B. stricta v1.2
Defline:  (1 of 3) PTHR20852//PTHR20852:SF59 - GLUTAMINE SYNTHETASE Genomic Order:  888
Name:  ? Bostr.19424s0888 Secondary Identifier:  ? PAC:30661113
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLNSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3282 Boechera stricta pathologic  
Bstricta PWY-381 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  
Bstricta PWY-6963 Boechera stricta pathologic  
Bstricta PWY-6964 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0888 0.5kb upstream 0.5kb upstream 2719 true Scaffold19424: 6450881-6453599 Boechera stricta
Bostr.19424s0888 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 6453100-6453599 Boechera stricta
Bostr.19424s0888 0.5kb downstream 0.5kb downstream 2719 true Scaffold19424: 6450381-6453099 Boechera stricta
Bostr.19424s0888 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 6450381-6450880 Boechera stricta
Bostr.19424s0888 1.0kb upstream 1.0kb upstream 3219 true Scaffold19424: 6450881-6454099 Boechera stricta
Bostr.19424s0888 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 6453100-6454099 Boechera stricta
Bostr.19424s0888 1.0kb downstream 1.0kb downstream 3219 true Scaffold19424: 6449881-6453099 Boechera stricta
Bostr.19424s0888 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 6449881-6450880 Boechera stricta
Bostr.19424s0888 2.0kb upstream 2.0kb upstream 4219 true Scaffold19424: 6450881-6455099 Boechera stricta
Bostr.19424s0888 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 6453100-6455099 Boechera stricta
Bostr.19424s0888 2.0kb downstream 2.0kb downstream 4219 true Scaffold19424: 6448881-6453099 Boechera stricta
Bostr.19424s0888 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 6448881-6450880 Boechera stricta
Bostr.19424s0888 5.0kb upstream 5.0kb upstream 7219 true Scaffold19424: 6450881-6458099 Boechera stricta
Bostr.19424s0888 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 6453100-6458099 Boechera stricta
Bostr.19424s0888 5.0kb downstream 5.0kb downstream 7219 true Scaffold19424: 6445881-6453099 Boechera stricta
Bostr.19424s0888 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 6445881-6450880 Boechera stricta
Bostr.19424s0888 10.0kb upstream 10.0kb upstream 12219 true Scaffold19424: 6450881-6463099 Boechera stricta
Bostr.19424s0888 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 6453100-6463099 Boechera stricta
Bostr.19424s0888 10.0kb downstream 10.0kb downstream 12219 true Scaffold19424: 6440881-6453099 Boechera stricta
Bostr.19424s0888 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 6440881-6450880 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372915 5261 Brassicaceae View MSA
123800457 5264 Brassicales-Malvales View MSA
124297870 5266 SBM View MSA
124149654 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain