Gene : Bostr.19424s0522 B. stricta v1.2
Defline:  (1 of 2) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  522
Name:  ? Bostr.19424s0522 Secondary Identifier:  ? PAC:30661971
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0522 0.5kb upstream 0.5kb upstream 3356 true Scaffold19424: 4388983-4392338 Boechera stricta
Bostr.19424s0522 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 4388983-4389482 Boechera stricta
Bostr.19424s0522 0.5kb downstream 0.5kb downstream 3356 true Scaffold19424: 4389483-4392838 Boechera stricta
Bostr.19424s0522 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 4392339-4392838 Boechera stricta
Bostr.19424s0522 1.0kb upstream 1.0kb upstream 3856 true Scaffold19424: 4388483-4392338 Boechera stricta
Bostr.19424s0522 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 4388483-4389482 Boechera stricta
Bostr.19424s0522 1.0kb downstream 1.0kb downstream 3856 true Scaffold19424: 4389483-4393338 Boechera stricta
Bostr.19424s0522 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 4392339-4393338 Boechera stricta
Bostr.19424s0522 2.0kb upstream 2.0kb upstream 4856 true Scaffold19424: 4387483-4392338 Boechera stricta
Bostr.19424s0522 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 4387483-4389482 Boechera stricta
Bostr.19424s0522 2.0kb downstream 2.0kb downstream 4856 true Scaffold19424: 4389483-4394338 Boechera stricta
Bostr.19424s0522 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 4392339-4394338 Boechera stricta
Bostr.19424s0522 5.0kb upstream 5.0kb upstream 7856 true Scaffold19424: 4384483-4392338 Boechera stricta
Bostr.19424s0522 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 4384483-4389482 Boechera stricta
Bostr.19424s0522 5.0kb downstream 5.0kb downstream 7856 true Scaffold19424: 4389483-4397338 Boechera stricta
Bostr.19424s0522 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 4392339-4397338 Boechera stricta
Bostr.19424s0522 10.0kb upstream 10.0kb upstream 12856 true Scaffold19424: 4379483-4392338 Boechera stricta
Bostr.19424s0522 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 4379483-4389482 Boechera stricta
Bostr.19424s0522 10.0kb downstream 10.0kb downstream 12856 true Scaffold19424: 4389483-4402338 Boechera stricta
Bostr.19424s0522 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 4392339-4402338 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360374 5261 Brassicaceae View MSA
123828162 5264 Brassicales-Malvales View MSA
124340624 5266 SBM View MSA
124241822 5268 Malvidae View MSA
124060880 5270 Rosid View MSA
123737477 5271 Pentapetalae View MSA
122788250 5272 Eudicot View MSA
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain