Gene : Bostr.20129s0454 B. stricta v1.2
Defline:  (1 of 1) 2.6.1.11 - Acetylornithine transaminase / Succinylornithine aminotransferase Genomic Order:  454
Name:  ? Bostr.20129s0454 Secondary Identifier:  ? PAC:30674007
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSYNBSUB-PWY Boechera stricta pathologic  
Bstricta ARGSYN-PWY Boechera stricta pathologic  
Bstricta GLUTORN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0454 0.5kb upstream 0.5kb upstream 3530 true Scaffold20129: 2466323-2469852 Boechera stricta
Bostr.20129s0454 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 2466323-2466822 Boechera stricta
Bostr.20129s0454 0.5kb downstream 0.5kb downstream 3530 true Scaffold20129: 2466823-2470352 Boechera stricta
Bostr.20129s0454 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 2469853-2470352 Boechera stricta
Bostr.20129s0454 1.0kb upstream 1.0kb upstream 4030 true Scaffold20129: 2465823-2469852 Boechera stricta
Bostr.20129s0454 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 2465823-2466822 Boechera stricta
Bostr.20129s0454 1.0kb downstream 1.0kb downstream 4030 true Scaffold20129: 2466823-2470852 Boechera stricta
Bostr.20129s0454 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 2469853-2470852 Boechera stricta
Bostr.20129s0454 2.0kb upstream 2.0kb upstream 5030 true Scaffold20129: 2464823-2469852 Boechera stricta
Bostr.20129s0454 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 2464823-2466822 Boechera stricta
Bostr.20129s0454 2.0kb downstream 2.0kb downstream 5030 true Scaffold20129: 2466823-2471852 Boechera stricta
Bostr.20129s0454 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 2469853-2471852 Boechera stricta
Bostr.20129s0454 5.0kb upstream 5.0kb upstream 8030 true Scaffold20129: 2461823-2469852 Boechera stricta
Bostr.20129s0454 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 2461823-2466822 Boechera stricta
Bostr.20129s0454 5.0kb downstream 5.0kb downstream 8030 true Scaffold20129: 2466823-2474852 Boechera stricta
Bostr.20129s0454 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 2469853-2474852 Boechera stricta
Bostr.20129s0454 10.0kb upstream 10.0kb upstream 13030 true Scaffold20129: 2456823-2469852 Boechera stricta
Bostr.20129s0454 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 2456823-2466822 Boechera stricta
Bostr.20129s0454 10.0kb downstream 10.0kb downstream 13030 true Scaffold20129: 2466823-2479852 Boechera stricta
Bostr.20129s0454 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 2469853-2479852 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372513 5261 Brassicaceae View MSA
123839882 5264 Brassicales-Malvales View MSA
124344979 5266 SBM View MSA
124239289 5268 Malvidae View MSA
124071750 5270 Rosid View MSA
123736750 5271 Pentapetalae View MSA
122787472 5272 Eudicot View MSA
122044767 5273 Angiosperm View MSA
121344135 5274 Embryophyte View MSA
123424486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain