Gene : Bostr.20129s0487 B. stricta v1.2
Defline:  (1 of 9) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  487
Name:  ? Bostr.20129s0487 Secondary Identifier:  ? PAC:30674119
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0487 0.5kb upstream 0.5kb upstream 2833 true Scaffold20129: 2612222-2615054 Boechera stricta
Bostr.20129s0487 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 2614555-2615054 Boechera stricta
Bostr.20129s0487 0.5kb downstream 0.5kb downstream 2833 true Scaffold20129: 2611722-2614554 Boechera stricta
Bostr.20129s0487 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 2611722-2612221 Boechera stricta
Bostr.20129s0487 1.0kb upstream 1.0kb upstream 3333 true Scaffold20129: 2612222-2615554 Boechera stricta
Bostr.20129s0487 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 2614555-2615554 Boechera stricta
Bostr.20129s0487 1.0kb downstream 1.0kb downstream 3333 true Scaffold20129: 2611222-2614554 Boechera stricta
Bostr.20129s0487 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 2611222-2612221 Boechera stricta
Bostr.20129s0487 2.0kb upstream 2.0kb upstream 4333 true Scaffold20129: 2612222-2616554 Boechera stricta
Bostr.20129s0487 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 2614555-2616554 Boechera stricta
Bostr.20129s0487 2.0kb downstream 2.0kb downstream 4333 true Scaffold20129: 2610222-2614554 Boechera stricta
Bostr.20129s0487 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 2610222-2612221 Boechera stricta
Bostr.20129s0487 5.0kb upstream 5.0kb upstream 7333 true Scaffold20129: 2612222-2619554 Boechera stricta
Bostr.20129s0487 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 2614555-2619554 Boechera stricta
Bostr.20129s0487 5.0kb downstream 5.0kb downstream 7333 true Scaffold20129: 2607222-2614554 Boechera stricta
Bostr.20129s0487 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 2607222-2612221 Boechera stricta
Bostr.20129s0487 10.0kb upstream 10.0kb upstream 12333 true Scaffold20129: 2612222-2624554 Boechera stricta
Bostr.20129s0487 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 2614555-2624554 Boechera stricta
Bostr.20129s0487 10.0kb downstream 10.0kb downstream 12333 true Scaffold20129: 2602222-2614554 Boechera stricta
Bostr.20129s0487 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 2602222-2612221 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363494 5261 Brassicaceae View MSA
123838872 5264 Brassicales-Malvales View MSA
124337336 5266 SBM View MSA
124238154 5268 Malvidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain