Gene : Bostr.20129s0495 B. stricta v1.2
Defline:  (1 of 3) PTHR12914 - PARTNER OF SLD5 Genomic Order:  495
Name:  ? Bostr.20129s0495 Secondary Identifier:  ? PAC:30674393
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0495 0.5kb upstream 0.5kb upstream 3060 true Scaffold20129: 2636449-2639508 Boechera stricta
Bostr.20129s0495 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 2639009-2639508 Boechera stricta
Bostr.20129s0495 0.5kb downstream 0.5kb downstream 3060 true Scaffold20129: 2635949-2639008 Boechera stricta
Bostr.20129s0495 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 2635949-2636448 Boechera stricta
Bostr.20129s0495 1.0kb upstream 1.0kb upstream 3560 true Scaffold20129: 2636449-2640008 Boechera stricta
Bostr.20129s0495 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 2639009-2640008 Boechera stricta
Bostr.20129s0495 1.0kb downstream 1.0kb downstream 3560 true Scaffold20129: 2635449-2639008 Boechera stricta
Bostr.20129s0495 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 2635449-2636448 Boechera stricta
Bostr.20129s0495 2.0kb upstream 2.0kb upstream 4560 true Scaffold20129: 2636449-2641008 Boechera stricta
Bostr.20129s0495 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 2639009-2641008 Boechera stricta
Bostr.20129s0495 2.0kb downstream 2.0kb downstream 4560 true Scaffold20129: 2634449-2639008 Boechera stricta
Bostr.20129s0495 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 2634449-2636448 Boechera stricta
Bostr.20129s0495 5.0kb upstream 5.0kb upstream 7560 true Scaffold20129: 2636449-2644008 Boechera stricta
Bostr.20129s0495 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 2639009-2644008 Boechera stricta
Bostr.20129s0495 5.0kb downstream 5.0kb downstream 7560 true Scaffold20129: 2631449-2639008 Boechera stricta
Bostr.20129s0495 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 2631449-2636448 Boechera stricta
Bostr.20129s0495 10.0kb upstream 10.0kb upstream 12560 true Scaffold20129: 2636449-2649008 Boechera stricta
Bostr.20129s0495 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 2639009-2649008 Boechera stricta
Bostr.20129s0495 10.0kb downstream 10.0kb downstream 12560 true Scaffold20129: 2626449-2639008 Boechera stricta
Bostr.20129s0495 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 2626449-2636448 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341974 5261 Brassicaceae Singleton cluster - no MSA
123841046 5264 Brassicales-Malvales View MSA
124322828 5266 SBM View MSA
124249183 5268 Malvidae View MSA
124065475 5270 Rosid View MSA
123736911 5271 Pentapetalae View MSA
122793813 5272 Eudicot View MSA
122045601 5273 Angiosperm View MSA
121344655 5274 Embryophyte View MSA
123424278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain