Gene : Bostr.20129s0379 B. stricta v1.2
Defline:  (1 of 1) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  379
Name:  ? Bostr.20129s0379 Secondary Identifier:  ? PAC:30674275
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUDEG-I-PWY Boechera stricta pathologic  
Bstricta PWY-4321 Boechera stricta pathologic  
Bstricta PWY-6473 Boechera stricta pathologic  
Bstricta PWY-6535 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0379 0.5kb upstream 0.5kb upstream 5837 true Scaffold20129: 2084208-2090044 Boechera stricta
Bostr.20129s0379 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 2089545-2090044 Boechera stricta
Bostr.20129s0379 0.5kb downstream 0.5kb downstream 5837 true Scaffold20129: 2083708-2089544 Boechera stricta
Bostr.20129s0379 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 2083708-2084207 Boechera stricta
Bostr.20129s0379 1.0kb upstream 1.0kb upstream 6337 true Scaffold20129: 2084208-2090544 Boechera stricta
Bostr.20129s0379 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 2089545-2090544 Boechera stricta
Bostr.20129s0379 1.0kb downstream 1.0kb downstream 6337 true Scaffold20129: 2083208-2089544 Boechera stricta
Bostr.20129s0379 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 2083208-2084207 Boechera stricta
Bostr.20129s0379 2.0kb upstream 2.0kb upstream 7337 true Scaffold20129: 2084208-2091544 Boechera stricta
Bostr.20129s0379 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 2089545-2091544 Boechera stricta
Bostr.20129s0379 2.0kb downstream 2.0kb downstream 7337 true Scaffold20129: 2082208-2089544 Boechera stricta
Bostr.20129s0379 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 2082208-2084207 Boechera stricta
Bostr.20129s0379 5.0kb upstream 5.0kb upstream 10337 true Scaffold20129: 2084208-2094544 Boechera stricta
Bostr.20129s0379 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 2089545-2094544 Boechera stricta
Bostr.20129s0379 5.0kb downstream 5.0kb downstream 10337 true Scaffold20129: 2079208-2089544 Boechera stricta
Bostr.20129s0379 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 2079208-2084207 Boechera stricta
Bostr.20129s0379 10.0kb upstream 10.0kb upstream 15337 true Scaffold20129: 2084208-2099544 Boechera stricta
Bostr.20129s0379 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 2089545-2099544 Boechera stricta
Bostr.20129s0379 10.0kb downstream 10.0kb downstream 15337 true Scaffold20129: 2074208-2089544 Boechera stricta
Bostr.20129s0379 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 2074208-2084207 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373089 5261 Brassicaceae View MSA
123832522 5264 Brassicales-Malvales View MSA
124343757 5266 SBM View MSA
124242671 5268 Malvidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain