Gene : Bostr.20129s0396 B. stricta v1.2
Defline:  (1 of 1) PTHR31989:SF48 - PROTEIN SOMBRERO Genomic Order:  396
Name:  ? Bostr.20129s0396 Secondary Identifier:  ? PAC:30674336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0396 0.5kb upstream 0.5kb upstream 2941 true Scaffold20129: 2162958-2165898 Boechera stricta
Bostr.20129s0396 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 2165399-2165898 Boechera stricta
Bostr.20129s0396 0.5kb downstream 0.5kb downstream 2941 true Scaffold20129: 2162458-2165398 Boechera stricta
Bostr.20129s0396 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 2162458-2162957 Boechera stricta
Bostr.20129s0396 1.0kb upstream 1.0kb upstream 3441 true Scaffold20129: 2162958-2166398 Boechera stricta
Bostr.20129s0396 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 2165399-2166398 Boechera stricta
Bostr.20129s0396 1.0kb downstream 1.0kb downstream 3441 true Scaffold20129: 2161958-2165398 Boechera stricta
Bostr.20129s0396 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 2161958-2162957 Boechera stricta
Bostr.20129s0396 2.0kb upstream 2.0kb upstream 4441 true Scaffold20129: 2162958-2167398 Boechera stricta
Bostr.20129s0396 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 2165399-2167398 Boechera stricta
Bostr.20129s0396 2.0kb downstream 2.0kb downstream 4441 true Scaffold20129: 2160958-2165398 Boechera stricta
Bostr.20129s0396 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 2160958-2162957 Boechera stricta
Bostr.20129s0396 5.0kb upstream 5.0kb upstream 7441 true Scaffold20129: 2162958-2170398 Boechera stricta
Bostr.20129s0396 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 2165399-2170398 Boechera stricta
Bostr.20129s0396 5.0kb downstream 5.0kb downstream 7441 true Scaffold20129: 2157958-2165398 Boechera stricta
Bostr.20129s0396 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 2157958-2162957 Boechera stricta
Bostr.20129s0396 10.0kb upstream 10.0kb upstream 12441 true Scaffold20129: 2162958-2175398 Boechera stricta
Bostr.20129s0396 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 2165399-2175398 Boechera stricta
Bostr.20129s0396 10.0kb downstream 10.0kb downstream 12441 true Scaffold20129: 2152958-2165398 Boechera stricta
Bostr.20129s0396 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 2152958-2162957 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378190 5261 Brassicaceae View MSA
123832696 5264 Brassicales-Malvales View MSA
124343530 5266 SBM View MSA
124251177 5268 Malvidae View MSA
124063722 5270 Rosid View MSA
123740377 5271 Pentapetalae View MSA
122788631 5272 Eudicot View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain