Gene : Bostr.20129s0333 B. stricta v1.2
Defline:  (1 of 1) 4.2.1.128//5.4.99.39//5.4.99.40//5.4.99.41 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase // Alpha-amyrin synthase / 2,3-oxidosqualene alpha-amyrin cyclase Genomic Order:  333
Name:  ? Bostr.20129s0333 Secondary Identifier:  ? PAC:30674073
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-112 Boechera stricta pathologic  
Bstricta PWY-5377 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0333 0.5kb upstream 0.5kb upstream 6555 true Scaffold20129: 1868077-1874631 Boechera stricta
Bostr.20129s0333 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 1868077-1868576 Boechera stricta
Bostr.20129s0333 0.5kb downstream 0.5kb downstream 6555 true Scaffold20129: 1868577-1875131 Boechera stricta
Bostr.20129s0333 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 1874632-1875131 Boechera stricta
Bostr.20129s0333 1.0kb upstream 1.0kb upstream 7055 true Scaffold20129: 1867577-1874631 Boechera stricta
Bostr.20129s0333 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 1867577-1868576 Boechera stricta
Bostr.20129s0333 1.0kb downstream 1.0kb downstream 7055 true Scaffold20129: 1868577-1875631 Boechera stricta
Bostr.20129s0333 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 1874632-1875631 Boechera stricta
Bostr.20129s0333 2.0kb upstream 2.0kb upstream 8055 true Scaffold20129: 1866577-1874631 Boechera stricta
Bostr.20129s0333 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 1866577-1868576 Boechera stricta
Bostr.20129s0333 2.0kb downstream 2.0kb downstream 8055 true Scaffold20129: 1868577-1876631 Boechera stricta
Bostr.20129s0333 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 1874632-1876631 Boechera stricta
Bostr.20129s0333 5.0kb upstream 5.0kb upstream 11055 true Scaffold20129: 1863577-1874631 Boechera stricta
Bostr.20129s0333 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 1863577-1868576 Boechera stricta
Bostr.20129s0333 5.0kb downstream 5.0kb downstream 11055 true Scaffold20129: 1868577-1879631 Boechera stricta
Bostr.20129s0333 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 1874632-1879631 Boechera stricta
Bostr.20129s0333 10.0kb upstream 10.0kb upstream 16055 true Scaffold20129: 1858577-1874631 Boechera stricta
Bostr.20129s0333 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 1858577-1868576 Boechera stricta
Bostr.20129s0333 10.0kb downstream 10.0kb downstream 16055 true Scaffold20129: 1868577-1884631 Boechera stricta
Bostr.20129s0333 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 1874632-1884631 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122370947 5261 Brassicaceae View MSA
123837659 5264 Brassicales-Malvales View MSA
124341185 5266 SBM View MSA
124240191 5268 Malvidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain