Gene : Bostr.20129s0166 B. stricta v1.2

Defline:  (1 of 2) PTHR21669 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS Genomic Order:  166
Name:  ? Bostr.20129s0166 Secondary Identifier:  ? PAC:30674111

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0166 0.5kb upstream 0.5kb upstream 5532 true Scaffold20129: 941982-947513 Boechera stricta
Bostr.20129s0166 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 941982-942481 Boechera stricta
Bostr.20129s0166 0.5kb downstream 0.5kb downstream 5532 true Scaffold20129: 942482-948013 Boechera stricta
Bostr.20129s0166 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 947514-948013 Boechera stricta
Bostr.20129s0166 1.0kb upstream 1.0kb upstream 6032 true Scaffold20129: 941482-947513 Boechera stricta
Bostr.20129s0166 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 941482-942481 Boechera stricta
Bostr.20129s0166 1.0kb downstream 1.0kb downstream 6032 true Scaffold20129: 942482-948513 Boechera stricta
Bostr.20129s0166 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 947514-948513 Boechera stricta
Bostr.20129s0166 2.0kb upstream 2.0kb upstream 7032 true Scaffold20129: 940482-947513 Boechera stricta
Bostr.20129s0166 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 940482-942481 Boechera stricta
Bostr.20129s0166 2.0kb downstream 2.0kb downstream 7032 true Scaffold20129: 942482-949513 Boechera stricta
Bostr.20129s0166 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 947514-949513 Boechera stricta
Bostr.20129s0166 5.0kb upstream 5.0kb upstream 10032 true Scaffold20129: 937482-947513 Boechera stricta
Bostr.20129s0166 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 937482-942481 Boechera stricta
Bostr.20129s0166 5.0kb downstream 5.0kb downstream 10032 true Scaffold20129: 942482-952513 Boechera stricta
Bostr.20129s0166 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 947514-952513 Boechera stricta
Bostr.20129s0166 10.0kb upstream 10.0kb upstream 15032 true Scaffold20129: 932482-947513 Boechera stricta
Bostr.20129s0166 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 932482-942481 Boechera stricta
Bostr.20129s0166 10.0kb downstream 10.0kb downstream 15032 true Scaffold20129: 942482-957513 Boechera stricta
Bostr.20129s0166 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 947514-957513 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379811 5261 Brassicaceae View MSA
123837582 5264 Brassicales-Malvales View MSA
124339372 5266 SBM View MSA
124240339 5268 Malvidae View MSA
124063112 5270 Rosid View MSA
123743839 5271 Pentapetalae View MSA
122787067 5272 Eudicot View MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain