Gene : Bostr.20129s0194 B. stricta v1.2

Defline:  (1 of 2) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  194
Name:  ? Bostr.20129s0194 Secondary Identifier:  ? PAC:30674039

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0194 0.5kb upstream 0.5kb upstream 3856 true Scaffold20129: 1078820-1082675 Boechera stricta
Bostr.20129s0194 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 1082176-1082675 Boechera stricta
Bostr.20129s0194 0.5kb downstream 0.5kb downstream 3856 true Scaffold20129: 1078320-1082175 Boechera stricta
Bostr.20129s0194 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 1078320-1078819 Boechera stricta
Bostr.20129s0194 1.0kb upstream 1.0kb upstream 4356 true Scaffold20129: 1078820-1083175 Boechera stricta
Bostr.20129s0194 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 1082176-1083175 Boechera stricta
Bostr.20129s0194 1.0kb downstream 1.0kb downstream 4356 true Scaffold20129: 1077820-1082175 Boechera stricta
Bostr.20129s0194 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 1077820-1078819 Boechera stricta
Bostr.20129s0194 2.0kb upstream 2.0kb upstream 5356 true Scaffold20129: 1078820-1084175 Boechera stricta
Bostr.20129s0194 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 1082176-1084175 Boechera stricta
Bostr.20129s0194 2.0kb downstream 2.0kb downstream 5356 true Scaffold20129: 1076820-1082175 Boechera stricta
Bostr.20129s0194 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 1076820-1078819 Boechera stricta
Bostr.20129s0194 5.0kb upstream 5.0kb upstream 8356 true Scaffold20129: 1078820-1087175 Boechera stricta
Bostr.20129s0194 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 1082176-1087175 Boechera stricta
Bostr.20129s0194 5.0kb downstream 5.0kb downstream 8356 true Scaffold20129: 1073820-1082175 Boechera stricta
Bostr.20129s0194 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 1073820-1078819 Boechera stricta
Bostr.20129s0194 10.0kb upstream 10.0kb upstream 13356 true Scaffold20129: 1078820-1092175 Boechera stricta
Bostr.20129s0194 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 1082176-1092175 Boechera stricta
Bostr.20129s0194 10.0kb downstream 10.0kb downstream 13356 true Scaffold20129: 1068820-1082175 Boechera stricta
Bostr.20129s0194 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 1068820-1078819 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380499 5261 Brassicaceae View MSA
123839144 5264 Brassicales-Malvales View MSA
124348232 5266 SBM View MSA
124250015 5268 Malvidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain