Gene : Bostr.20129s0076 B. stricta v1.2
Defline:  (1 of 1) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Genomic Order:  76
Name:  ? Bostr.20129s0076 Secondary Identifier:  ? PAC:30674204
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20129s0076 0.5kb upstream 0.5kb upstream 3640 true Scaffold20129: 404997-408636 Boechera stricta
Bostr.20129s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold20129: 408137-408636 Boechera stricta
Bostr.20129s0076 0.5kb downstream 0.5kb downstream 3640 true Scaffold20129: 404497-408136 Boechera stricta
Bostr.20129s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold20129: 404497-404996 Boechera stricta
Bostr.20129s0076 1.0kb upstream 1.0kb upstream 4140 true Scaffold20129: 404997-409136 Boechera stricta
Bostr.20129s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold20129: 408137-409136 Boechera stricta
Bostr.20129s0076 1.0kb downstream 1.0kb downstream 4140 true Scaffold20129: 403997-408136 Boechera stricta
Bostr.20129s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold20129: 403997-404996 Boechera stricta
Bostr.20129s0076 2.0kb upstream 2.0kb upstream 5140 true Scaffold20129: 404997-410136 Boechera stricta
Bostr.20129s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold20129: 408137-410136 Boechera stricta
Bostr.20129s0076 2.0kb downstream 2.0kb downstream 5140 true Scaffold20129: 402997-408136 Boechera stricta
Bostr.20129s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold20129: 402997-404996 Boechera stricta
Bostr.20129s0076 5.0kb upstream 5.0kb upstream 8140 true Scaffold20129: 404997-413136 Boechera stricta
Bostr.20129s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold20129: 408137-413136 Boechera stricta
Bostr.20129s0076 5.0kb downstream 5.0kb downstream 8140 true Scaffold20129: 399997-408136 Boechera stricta
Bostr.20129s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold20129: 399997-404996 Boechera stricta
Bostr.20129s0076 10.0kb upstream 10.0kb upstream 13140 true Scaffold20129: 404997-418136 Boechera stricta
Bostr.20129s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold20129: 408137-418136 Boechera stricta
Bostr.20129s0076 10.0kb downstream 10.0kb downstream 13140 true Scaffold20129: 394997-408136 Boechera stricta
Bostr.20129s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold20129: 394997-404996 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373711 5261 Brassicaceae View MSA
123827563 5264 Brassicales-Malvales View MSA
124338985 5266 SBM View MSA
124237474 5268 Malvidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain