Gene : Bostr.20055s0054 B. stricta v1.2
Defline:  (1 of 1) PTHR11995 - NADH DEHYDROGENASE Genomic Order:  54
Name:  ? Bostr.20055s0054 Secondary Identifier:  ? PAC:30677425
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-4302 Boechera stricta pathologic  
Bstricta PWY-5083 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20055s0054 0.5kb upstream 0.5kb upstream 2564 true Scaffold20055: 222447-225010 Boechera stricta
Bostr.20055s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold20055: 222447-222946 Boechera stricta
Bostr.20055s0054 0.5kb downstream 0.5kb downstream 2564 true Scaffold20055: 222947-225510 Boechera stricta
Bostr.20055s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold20055: 225011-225510 Boechera stricta
Bostr.20055s0054 1.0kb upstream 1.0kb upstream 3064 true Scaffold20055: 221947-225010 Boechera stricta
Bostr.20055s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold20055: 221947-222946 Boechera stricta
Bostr.20055s0054 1.0kb downstream 1.0kb downstream 3064 true Scaffold20055: 222947-226010 Boechera stricta
Bostr.20055s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold20055: 225011-226010 Boechera stricta
Bostr.20055s0054 2.0kb upstream 2.0kb upstream 4064 true Scaffold20055: 220947-225010 Boechera stricta
Bostr.20055s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold20055: 220947-222946 Boechera stricta
Bostr.20055s0054 2.0kb downstream 2.0kb downstream 4064 true Scaffold20055: 222947-227010 Boechera stricta
Bostr.20055s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold20055: 225011-227010 Boechera stricta
Bostr.20055s0054 5.0kb upstream 5.0kb upstream 7064 true Scaffold20055: 217947-225010 Boechera stricta
Bostr.20055s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold20055: 217947-222946 Boechera stricta
Bostr.20055s0054 5.0kb downstream 5.0kb downstream 7064 true Scaffold20055: 222947-230010 Boechera stricta
Bostr.20055s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold20055: 225011-230010 Boechera stricta
Bostr.20055s0054 10.0kb upstream 10.0kb upstream 12064 true Scaffold20055: 212947-225010 Boechera stricta
Bostr.20055s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold20055: 212947-222946 Boechera stricta
Bostr.20055s0054 10.0kb downstream 10.0kb downstream 12064 true Scaffold20055: 222947-235010 Boechera stricta
Bostr.20055s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold20055: 225011-235010 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
122370395 5261 Brassicaceae View MSA
123830122 5264 Brassicales-Malvales View MSA
124350189 5266 SBM View MSA
124250688 5268 Malvidae View MSA
124062804 5270 Rosid View MSA
123752382 5271 Pentapetalae View MSA
122791992 5272 Eudicot View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain