Gene : Bostr.20055s0070 B. stricta v1.2
Defline:  (1 of 2) PTHR23406:SF31 - NADP-DEPENDENT MALIC ENZYME 2-RELATED Genomic Order:  70
Name:  ? Bostr.20055s0070 Secondary Identifier:  ? PAC:30677412
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCONEO-PWY Boechera stricta pathologic  
Bstricta PWY-241 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20055s0070 0.5kb upstream 0.5kb upstream 4504 true Scaffold20055: 291011-295514 Boechera stricta
Bostr.20055s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold20055: 295015-295514 Boechera stricta
Bostr.20055s0070 0.5kb downstream 0.5kb downstream 4504 true Scaffold20055: 290511-295014 Boechera stricta
Bostr.20055s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold20055: 290511-291010 Boechera stricta
Bostr.20055s0070 1.0kb upstream 1.0kb upstream 5004 true Scaffold20055: 291011-296014 Boechera stricta
Bostr.20055s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold20055: 295015-296014 Boechera stricta
Bostr.20055s0070 1.0kb downstream 1.0kb downstream 5004 true Scaffold20055: 290011-295014 Boechera stricta
Bostr.20055s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold20055: 290011-291010 Boechera stricta
Bostr.20055s0070 2.0kb upstream 2.0kb upstream 6004 true Scaffold20055: 291011-297014 Boechera stricta
Bostr.20055s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold20055: 295015-297014 Boechera stricta
Bostr.20055s0070 2.0kb downstream 2.0kb downstream 6004 true Scaffold20055: 289011-295014 Boechera stricta
Bostr.20055s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold20055: 289011-291010 Boechera stricta
Bostr.20055s0070 5.0kb upstream 5.0kb upstream 9004 true Scaffold20055: 291011-300014 Boechera stricta
Bostr.20055s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold20055: 295015-300014 Boechera stricta
Bostr.20055s0070 5.0kb downstream 5.0kb downstream 9004 true Scaffold20055: 286011-295014 Boechera stricta
Bostr.20055s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold20055: 286011-291010 Boechera stricta
Bostr.20055s0070 10.0kb upstream 10.0kb upstream 14004 true Scaffold20055: 291011-305014 Boechera stricta
Bostr.20055s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold20055: 295015-305014 Boechera stricta
Bostr.20055s0070 10.0kb downstream 10.0kb downstream 14004 true Scaffold20055: 281011-295014 Boechera stricta
Bostr.20055s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold20055: 281011-291010 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380041 5261 Brassicaceae View MSA
123837048 5264 Brassicales-Malvales View MSA
124345373 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain