Gene : Bostr.20055s0099 B. stricta v1.2
Defline:  (1 of 1) PTHR11624:SF64 - 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEIN Genomic Order:  99
Name:  ? Bostr.20055s0099 Secondary Identifier:  ? PAC:30677497
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7560 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20055s0099 0.5kb upstream 0.5kb upstream 3998 true Scaffold20055: 446313-450310 Boechera stricta
Bostr.20055s0099 0.5kb upstream 0.5kb upstream 500 false Scaffold20055: 449811-450310 Boechera stricta
Bostr.20055s0099 0.5kb downstream 0.5kb downstream 3998 true Scaffold20055: 445813-449810 Boechera stricta
Bostr.20055s0099 0.5kb downstream 0.5kb downstream 500 false Scaffold20055: 445813-446312 Boechera stricta
Bostr.20055s0099 1.0kb upstream 1.0kb upstream 4498 true Scaffold20055: 446313-450810 Boechera stricta
Bostr.20055s0099 1.0kb upstream 1.0kb upstream 1000 false Scaffold20055: 449811-450810 Boechera stricta
Bostr.20055s0099 1.0kb downstream 1.0kb downstream 4498 true Scaffold20055: 445313-449810 Boechera stricta
Bostr.20055s0099 1.0kb downstream 1.0kb downstream 1000 false Scaffold20055: 445313-446312 Boechera stricta
Bostr.20055s0099 2.0kb upstream 2.0kb upstream 5498 true Scaffold20055: 446313-451810 Boechera stricta
Bostr.20055s0099 2.0kb upstream 2.0kb upstream 2000 false Scaffold20055: 449811-451810 Boechera stricta
Bostr.20055s0099 2.0kb downstream 2.0kb downstream 5498 true Scaffold20055: 444313-449810 Boechera stricta
Bostr.20055s0099 2.0kb downstream 2.0kb downstream 2000 false Scaffold20055: 444313-446312 Boechera stricta
Bostr.20055s0099 5.0kb upstream 5.0kb upstream 8498 true Scaffold20055: 446313-454810 Boechera stricta
Bostr.20055s0099 5.0kb upstream 5.0kb upstream 5000 false Scaffold20055: 449811-454810 Boechera stricta
Bostr.20055s0099 5.0kb downstream 5.0kb downstream 8498 true Scaffold20055: 441313-449810 Boechera stricta
Bostr.20055s0099 5.0kb downstream 5.0kb downstream 5000 false Scaffold20055: 441313-446312 Boechera stricta
Bostr.20055s0099 10.0kb upstream 10.0kb upstream 13498 true Scaffold20055: 446313-459810 Boechera stricta
Bostr.20055s0099 10.0kb upstream 10.0kb upstream 10000 false Scaffold20055: 449811-459810 Boechera stricta
Bostr.20055s0099 10.0kb downstream 10.0kb downstream 13498 true Scaffold20055: 436313-449810 Boechera stricta
Bostr.20055s0099 10.0kb downstream 10.0kb downstream 10000 false Scaffold20055: 436313-446312 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373986 5261 Brassicaceae View MSA
123829072 5264 Brassicales-Malvales View MSA
124342617 5266 SBM View MSA
124239225 5268 Malvidae View MSA
124066019 5270 Rosid View MSA
123737503 5271 Pentapetalae View MSA
122791788 5272 Eudicot View MSA
122044949 5273 Angiosperm View MSA
121310367 5274 Embryophyte View MSA
123347869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain