Gene : Bostr.22252s0230 B. stricta v1.2
Defline:  (1 of 1) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  230
Name:  ? Bostr.22252s0230 Secondary Identifier:  ? PAC:30659906
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0230 0.5kb upstream 0.5kb upstream 3533 true Scaffold22252: 1034861-1038393 Boechera stricta
Bostr.22252s0230 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1037894-1038393 Boechera stricta
Bostr.22252s0230 0.5kb downstream 0.5kb downstream 3533 true Scaffold22252: 1034361-1037893 Boechera stricta
Bostr.22252s0230 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1034361-1034860 Boechera stricta
Bostr.22252s0230 1.0kb upstream 1.0kb upstream 4033 true Scaffold22252: 1034861-1038893 Boechera stricta
Bostr.22252s0230 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1037894-1038893 Boechera stricta
Bostr.22252s0230 1.0kb downstream 1.0kb downstream 4033 true Scaffold22252: 1033861-1037893 Boechera stricta
Bostr.22252s0230 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1033861-1034860 Boechera stricta
Bostr.22252s0230 2.0kb upstream 2.0kb upstream 5033 true Scaffold22252: 1034861-1039893 Boechera stricta
Bostr.22252s0230 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1037894-1039893 Boechera stricta
Bostr.22252s0230 2.0kb downstream 2.0kb downstream 5033 true Scaffold22252: 1032861-1037893 Boechera stricta
Bostr.22252s0230 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1032861-1034860 Boechera stricta
Bostr.22252s0230 5.0kb upstream 5.0kb upstream 8033 true Scaffold22252: 1034861-1042893 Boechera stricta
Bostr.22252s0230 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1037894-1042893 Boechera stricta
Bostr.22252s0230 5.0kb downstream 5.0kb downstream 8033 true Scaffold22252: 1029861-1037893 Boechera stricta
Bostr.22252s0230 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1029861-1034860 Boechera stricta
Bostr.22252s0230 10.0kb upstream 10.0kb upstream 13033 true Scaffold22252: 1034861-1047893 Boechera stricta
Bostr.22252s0230 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1037894-1047893 Boechera stricta
Bostr.22252s0230 10.0kb downstream 10.0kb downstream 13033 true Scaffold22252: 1024861-1037893 Boechera stricta
Bostr.22252s0230 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1024861-1034860 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369807 5261 Brassicaceae View MSA
123839826 5264 Brassicales-Malvales View MSA
124338536 5266 SBM View MSA
124237828 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain