Gene : Bostr.22252s0245 B. stricta v1.2
Defline:  (1 of 4) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  245
Name:  ? Bostr.22252s0245 Secondary Identifier:  ? PAC:30659707
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0245 0.5kb upstream 0.5kb upstream 2439 true Scaffold22252: 1092066-1094504 Boechera stricta
Bostr.22252s0245 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 1092066-1092565 Boechera stricta
Bostr.22252s0245 0.5kb downstream 0.5kb downstream 2439 true Scaffold22252: 1092566-1095004 Boechera stricta
Bostr.22252s0245 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 1094505-1095004 Boechera stricta
Bostr.22252s0245 1.0kb upstream 1.0kb upstream 2939 true Scaffold22252: 1091566-1094504 Boechera stricta
Bostr.22252s0245 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 1091566-1092565 Boechera stricta
Bostr.22252s0245 1.0kb downstream 1.0kb downstream 2939 true Scaffold22252: 1092566-1095504 Boechera stricta
Bostr.22252s0245 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 1094505-1095504 Boechera stricta
Bostr.22252s0245 2.0kb upstream 2.0kb upstream 3939 true Scaffold22252: 1090566-1094504 Boechera stricta
Bostr.22252s0245 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 1090566-1092565 Boechera stricta
Bostr.22252s0245 2.0kb downstream 2.0kb downstream 3939 true Scaffold22252: 1092566-1096504 Boechera stricta
Bostr.22252s0245 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 1094505-1096504 Boechera stricta
Bostr.22252s0245 5.0kb upstream 5.0kb upstream 6939 true Scaffold22252: 1087566-1094504 Boechera stricta
Bostr.22252s0245 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 1087566-1092565 Boechera stricta
Bostr.22252s0245 5.0kb downstream 5.0kb downstream 6939 true Scaffold22252: 1092566-1099504 Boechera stricta
Bostr.22252s0245 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 1094505-1099504 Boechera stricta
Bostr.22252s0245 10.0kb upstream 10.0kb upstream 11939 true Scaffold22252: 1082566-1094504 Boechera stricta
Bostr.22252s0245 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 1082566-1092565 Boechera stricta
Bostr.22252s0245 10.0kb downstream 10.0kb downstream 11939 true Scaffold22252: 1092566-1104504 Boechera stricta
Bostr.22252s0245 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 1094505-1104504 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373108 5261 Brassicaceae View MSA
123841196 5264 Brassicales-Malvales View MSA
124349703 5266 SBM View MSA
124252748 5268 Malvidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain