Gene : Bostr.22252s0102 B. stricta v1.2

Defline:  (1 of 4) PTHR11652 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  102
Name:  ? Bostr.22252s0102 Secondary Identifier:  ? PAC:30659691

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0102 0.5kb upstream 0.5kb upstream 2024 true Scaffold22252: 490147-492170 Boechera stricta
Bostr.22252s0102 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 490147-490646 Boechera stricta
Bostr.22252s0102 0.5kb downstream 0.5kb downstream 2024 true Scaffold22252: 490647-492670 Boechera stricta
Bostr.22252s0102 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 492171-492670 Boechera stricta
Bostr.22252s0102 1.0kb upstream 1.0kb upstream 2524 true Scaffold22252: 489647-492170 Boechera stricta
Bostr.22252s0102 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 489647-490646 Boechera stricta
Bostr.22252s0102 1.0kb downstream 1.0kb downstream 2524 true Scaffold22252: 490647-493170 Boechera stricta
Bostr.22252s0102 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 492171-493170 Boechera stricta
Bostr.22252s0102 2.0kb upstream 2.0kb upstream 3524 true Scaffold22252: 488647-492170 Boechera stricta
Bostr.22252s0102 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 488647-490646 Boechera stricta
Bostr.22252s0102 2.0kb downstream 2.0kb downstream 3524 true Scaffold22252: 490647-494170 Boechera stricta
Bostr.22252s0102 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 492171-494170 Boechera stricta
Bostr.22252s0102 5.0kb upstream 5.0kb upstream 6524 true Scaffold22252: 485647-492170 Boechera stricta
Bostr.22252s0102 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 485647-490646 Boechera stricta
Bostr.22252s0102 5.0kb downstream 5.0kb downstream 6524 true Scaffold22252: 490647-497170 Boechera stricta
Bostr.22252s0102 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 492171-497170 Boechera stricta
Bostr.22252s0102 10.0kb upstream 10.0kb upstream 11524 true Scaffold22252: 480647-492170 Boechera stricta
Bostr.22252s0102 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 480647-490646 Boechera stricta
Bostr.22252s0102 10.0kb downstream 10.0kb downstream 11524 true Scaffold22252: 490647-502170 Boechera stricta
Bostr.22252s0102 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 492171-502170 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380824 5261 Brassicaceae View MSA
123837823 5264 Brassicales-Malvales View MSA
124350108 5266 SBM View MSA
124241018 5268 Malvidae View MSA
124070062 5270 Rosid View MSA
123740818 5271 Pentapetalae View MSA
122794573 5272 Eudicot View MSA
122046151 5273 Angiosperm View MSA
121344196 5274 Embryophyte View MSA
123424660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain