Gene : Bostr.22252s0106 B. stricta v1.2
Defline:  (1 of 2) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  106
Name:  ? Bostr.22252s0106 Secondary Identifier:  ? PAC:30659808
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2261 Boechera stricta pathologic  
Bstricta PWY-6959 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0106 0.5kb upstream 0.5kb upstream 2862 true Scaffold22252: 503179-506040 Boechera stricta
Bostr.22252s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 505541-506040 Boechera stricta
Bostr.22252s0106 0.5kb downstream 0.5kb downstream 2862 true Scaffold22252: 502679-505540 Boechera stricta
Bostr.22252s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 502679-503178 Boechera stricta
Bostr.22252s0106 1.0kb upstream 1.0kb upstream 3362 true Scaffold22252: 503179-506540 Boechera stricta
Bostr.22252s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 505541-506540 Boechera stricta
Bostr.22252s0106 1.0kb downstream 1.0kb downstream 3362 true Scaffold22252: 502179-505540 Boechera stricta
Bostr.22252s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 502179-503178 Boechera stricta
Bostr.22252s0106 2.0kb upstream 2.0kb upstream 4362 true Scaffold22252: 503179-507540 Boechera stricta
Bostr.22252s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 505541-507540 Boechera stricta
Bostr.22252s0106 2.0kb downstream 2.0kb downstream 4362 true Scaffold22252: 501179-505540 Boechera stricta
Bostr.22252s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 501179-503178 Boechera stricta
Bostr.22252s0106 5.0kb upstream 5.0kb upstream 7362 true Scaffold22252: 503179-510540 Boechera stricta
Bostr.22252s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 505541-510540 Boechera stricta
Bostr.22252s0106 5.0kb downstream 5.0kb downstream 7362 true Scaffold22252: 498179-505540 Boechera stricta
Bostr.22252s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 498179-503178 Boechera stricta
Bostr.22252s0106 10.0kb upstream 10.0kb upstream 12362 true Scaffold22252: 503179-515540 Boechera stricta
Bostr.22252s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 505541-515540 Boechera stricta
Bostr.22252s0106 10.0kb downstream 10.0kb downstream 12362 true Scaffold22252: 493179-505540 Boechera stricta
Bostr.22252s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 493179-503178 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372503 5261 Brassicaceae View MSA
123833183 5264 Brassicales-Malvales View MSA
124345935 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain