Gene : Bostr.22252s0114 B. stricta v1.2
Defline:  (1 of 2) PTHR12181:SF12 - PROTEIN LPIN-1 Genomic Order:  114
Name:  ? Bostr.22252s0114 Secondary Identifier:  ? PAC:30659814
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRIGLSYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0114 0.5kb upstream 0.5kb upstream 5260 true Scaffold22252: 522801-528060 Boechera stricta
Bostr.22252s0114 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 522801-523300 Boechera stricta
Bostr.22252s0114 0.5kb downstream 0.5kb downstream 5260 true Scaffold22252: 523301-528560 Boechera stricta
Bostr.22252s0114 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 528061-528560 Boechera stricta
Bostr.22252s0114 1.0kb upstream 1.0kb upstream 5760 true Scaffold22252: 522301-528060 Boechera stricta
Bostr.22252s0114 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 522301-523300 Boechera stricta
Bostr.22252s0114 1.0kb downstream 1.0kb downstream 5760 true Scaffold22252: 523301-529060 Boechera stricta
Bostr.22252s0114 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 528061-529060 Boechera stricta
Bostr.22252s0114 2.0kb upstream 2.0kb upstream 6760 true Scaffold22252: 521301-528060 Boechera stricta
Bostr.22252s0114 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 521301-523300 Boechera stricta
Bostr.22252s0114 2.0kb downstream 2.0kb downstream 6760 true Scaffold22252: 523301-530060 Boechera stricta
Bostr.22252s0114 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 528061-530060 Boechera stricta
Bostr.22252s0114 5.0kb upstream 5.0kb upstream 9760 true Scaffold22252: 518301-528060 Boechera stricta
Bostr.22252s0114 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 518301-523300 Boechera stricta
Bostr.22252s0114 5.0kb downstream 5.0kb downstream 9760 true Scaffold22252: 523301-533060 Boechera stricta
Bostr.22252s0114 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 528061-533060 Boechera stricta
Bostr.22252s0114 10.0kb upstream 10.0kb upstream 14760 true Scaffold22252: 513301-528060 Boechera stricta
Bostr.22252s0114 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 513301-523300 Boechera stricta
Bostr.22252s0114 10.0kb downstream 10.0kb downstream 14760 true Scaffold22252: 523301-538060 Boechera stricta
Bostr.22252s0114 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 528061-538060 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366067 5261 Brassicaceae View MSA
123839656 5264 Brassicales-Malvales View MSA
124322631 5266 SBM View MSA
124248073 5268 Malvidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain