Gene : Bostr.22252s0146 B. stricta v1.2
Defline:  (1 of 2) PTHR11709:SF9 - LACCASE-7-RELATED Genomic Order:  146
Name:  ? Bostr.22252s0146 Secondary Identifier:  ? PAC:30659565
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0146 0.5kb upstream 0.5kb upstream 4156 true Scaffold22252: 677429-681584 Boechera stricta
Bostr.22252s0146 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 677429-677928 Boechera stricta
Bostr.22252s0146 0.5kb downstream 0.5kb downstream 4156 true Scaffold22252: 677929-682084 Boechera stricta
Bostr.22252s0146 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 681585-682084 Boechera stricta
Bostr.22252s0146 1.0kb upstream 1.0kb upstream 4656 true Scaffold22252: 676929-681584 Boechera stricta
Bostr.22252s0146 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 676929-677928 Boechera stricta
Bostr.22252s0146 1.0kb downstream 1.0kb downstream 4656 true Scaffold22252: 677929-682584 Boechera stricta
Bostr.22252s0146 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 681585-682584 Boechera stricta
Bostr.22252s0146 2.0kb upstream 2.0kb upstream 5656 true Scaffold22252: 675929-681584 Boechera stricta
Bostr.22252s0146 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 675929-677928 Boechera stricta
Bostr.22252s0146 2.0kb downstream 2.0kb downstream 5656 true Scaffold22252: 677929-683584 Boechera stricta
Bostr.22252s0146 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 681585-683584 Boechera stricta
Bostr.22252s0146 5.0kb upstream 5.0kb upstream 8656 true Scaffold22252: 672929-681584 Boechera stricta
Bostr.22252s0146 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 672929-677928 Boechera stricta
Bostr.22252s0146 5.0kb downstream 5.0kb downstream 8656 true Scaffold22252: 677929-686584 Boechera stricta
Bostr.22252s0146 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 681585-686584 Boechera stricta
Bostr.22252s0146 10.0kb upstream 10.0kb upstream 13656 true Scaffold22252: 667929-681584 Boechera stricta
Bostr.22252s0146 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 667929-677928 Boechera stricta
Bostr.22252s0146 10.0kb downstream 10.0kb downstream 13656 true Scaffold22252: 677929-691584 Boechera stricta
Bostr.22252s0146 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 681585-691584 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365936 5261 Brassicaceae View MSA
123835955 5264 Brassicales-Malvales View MSA
124351381 5266 SBM View MSA
124241371 5268 Malvidae View MSA
124063010 5270 Rosid View MSA
123744163 5271 Pentapetalae View MSA
122787244 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain