Gene : Bostr.22252s0025 B. stricta v1.2
Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  25
Name:  ? Bostr.22252s0025 Secondary Identifier:  ? PAC:30659749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6441 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0025 0.5kb upstream 0.5kb upstream 3958 true Scaffold22252: 119848-123805 Boechera stricta
Bostr.22252s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 123306-123805 Boechera stricta
Bostr.22252s0025 0.5kb downstream 0.5kb downstream 3958 true Scaffold22252: 119348-123305 Boechera stricta
Bostr.22252s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 119348-119847 Boechera stricta
Bostr.22252s0025 1.0kb upstream 1.0kb upstream 4458 true Scaffold22252: 119848-124305 Boechera stricta
Bostr.22252s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 123306-124305 Boechera stricta
Bostr.22252s0025 1.0kb downstream 1.0kb downstream 4458 true Scaffold22252: 118848-123305 Boechera stricta
Bostr.22252s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 118848-119847 Boechera stricta
Bostr.22252s0025 2.0kb upstream 2.0kb upstream 5458 true Scaffold22252: 119848-125305 Boechera stricta
Bostr.22252s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 123306-125305 Boechera stricta
Bostr.22252s0025 2.0kb downstream 2.0kb downstream 5458 true Scaffold22252: 117848-123305 Boechera stricta
Bostr.22252s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 117848-119847 Boechera stricta
Bostr.22252s0025 5.0kb upstream 5.0kb upstream 8458 true Scaffold22252: 119848-128305 Boechera stricta
Bostr.22252s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 123306-128305 Boechera stricta
Bostr.22252s0025 5.0kb downstream 5.0kb downstream 8458 true Scaffold22252: 114848-123305 Boechera stricta
Bostr.22252s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 114848-119847 Boechera stricta
Bostr.22252s0025 10.0kb upstream 10.0kb upstream 13458 true Scaffold22252: 119848-133305 Boechera stricta
Bostr.22252s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 123306-133305 Boechera stricta
Bostr.22252s0025 10.0kb downstream 10.0kb downstream 13458 true Scaffold22252: 109848-123305 Boechera stricta
Bostr.22252s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 109848-119847 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362933 5261 Brassicaceae View MSA
123830834 5264 Brassicales-Malvales View MSA
124341216 5266 SBM View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain