Gene : Bostr.22252s0060 B. stricta v1.2
Defline:  (1 of 1) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase Genomic Order:  60
Name:  ? Bostr.22252s0060 Secondary Identifier:  ? PAC:30659911
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta BRANCHED-CHAIN-AA-SYN-PWY Boechera stricta pathologic  
Bstricta ILEUSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3001 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.22252s0060 0.5kb upstream 0.5kb upstream 3556 true Scaffold22252: 285466-289021 Boechera stricta
Bostr.22252s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold22252: 285466-285965 Boechera stricta
Bostr.22252s0060 0.5kb downstream 0.5kb downstream 3556 true Scaffold22252: 285966-289521 Boechera stricta
Bostr.22252s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold22252: 289022-289521 Boechera stricta
Bostr.22252s0060 1.0kb upstream 1.0kb upstream 4056 true Scaffold22252: 284966-289021 Boechera stricta
Bostr.22252s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold22252: 284966-285965 Boechera stricta
Bostr.22252s0060 1.0kb downstream 1.0kb downstream 4056 true Scaffold22252: 285966-290021 Boechera stricta
Bostr.22252s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold22252: 289022-290021 Boechera stricta
Bostr.22252s0060 2.0kb upstream 2.0kb upstream 5056 true Scaffold22252: 283966-289021 Boechera stricta
Bostr.22252s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold22252: 283966-285965 Boechera stricta
Bostr.22252s0060 2.0kb downstream 2.0kb downstream 5056 true Scaffold22252: 285966-291021 Boechera stricta
Bostr.22252s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold22252: 289022-291021 Boechera stricta
Bostr.22252s0060 5.0kb upstream 5.0kb upstream 8056 true Scaffold22252: 280966-289021 Boechera stricta
Bostr.22252s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold22252: 280966-285965 Boechera stricta
Bostr.22252s0060 5.0kb downstream 5.0kb downstream 8056 true Scaffold22252: 285966-294021 Boechera stricta
Bostr.22252s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold22252: 289022-294021 Boechera stricta
Bostr.22252s0060 10.0kb upstream 10.0kb upstream 13056 true Scaffold22252: 275966-289021 Boechera stricta
Bostr.22252s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold22252: 275966-285965 Boechera stricta
Bostr.22252s0060 10.0kb downstream 10.0kb downstream 13056 true Scaffold22252: 285966-299021 Boechera stricta
Bostr.22252s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold22252: 289022-299021 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040897 5273 Angiosperm View MSA
122377421 5261 Brassicaceae View MSA
123831169 5264 Brassicales-Malvales View MSA
124337828 5266 SBM View MSA
124240425 5268 Malvidae View MSA
124062087 5270 Rosid View MSA
123737037 5271 Pentapetalae View MSA
122787691 5272 Eudicot View MSA
121344792 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain