Gene : Bostr.20903s0204 B. stricta v1.2
Defline:  (1 of 3) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  204
Name:  ? Bostr.20903s0204 Secondary Identifier:  ? PAC:30668964
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20903s0204 0.5kb upstream 0.5kb upstream 3121 true Scaffold20903: 926366-929486 Boechera stricta
Bostr.20903s0204 0.5kb upstream 0.5kb upstream 500 false Scaffold20903: 928987-929486 Boechera stricta
Bostr.20903s0204 0.5kb downstream 0.5kb downstream 3121 true Scaffold20903: 925866-928986 Boechera stricta
Bostr.20903s0204 0.5kb downstream 0.5kb downstream 500 false Scaffold20903: 925866-926365 Boechera stricta
Bostr.20903s0204 1.0kb upstream 1.0kb upstream 3621 true Scaffold20903: 926366-929986 Boechera stricta
Bostr.20903s0204 1.0kb upstream 1.0kb upstream 1000 false Scaffold20903: 928987-929986 Boechera stricta
Bostr.20903s0204 1.0kb downstream 1.0kb downstream 3621 true Scaffold20903: 925366-928986 Boechera stricta
Bostr.20903s0204 1.0kb downstream 1.0kb downstream 1000 false Scaffold20903: 925366-926365 Boechera stricta
Bostr.20903s0204 2.0kb upstream 2.0kb upstream 4621 true Scaffold20903: 926366-930986 Boechera stricta
Bostr.20903s0204 2.0kb upstream 2.0kb upstream 2000 false Scaffold20903: 928987-930986 Boechera stricta
Bostr.20903s0204 2.0kb downstream 2.0kb downstream 4621 true Scaffold20903: 924366-928986 Boechera stricta
Bostr.20903s0204 2.0kb downstream 2.0kb downstream 2000 false Scaffold20903: 924366-926365 Boechera stricta
Bostr.20903s0204 5.0kb upstream 5.0kb upstream 7621 true Scaffold20903: 926366-933986 Boechera stricta
Bostr.20903s0204 5.0kb upstream 5.0kb upstream 5000 false Scaffold20903: 928987-933986 Boechera stricta
Bostr.20903s0204 5.0kb downstream 5.0kb downstream 7621 true Scaffold20903: 921366-928986 Boechera stricta
Bostr.20903s0204 5.0kb downstream 5.0kb downstream 5000 false Scaffold20903: 921366-926365 Boechera stricta
Bostr.20903s0204 10.0kb upstream 10.0kb upstream 12621 true Scaffold20903: 926366-938986 Boechera stricta
Bostr.20903s0204 10.0kb upstream 10.0kb upstream 10000 false Scaffold20903: 928987-938986 Boechera stricta
Bostr.20903s0204 10.0kb downstream 10.0kb downstream 12621 true Scaffold20903: 916366-928986 Boechera stricta
Bostr.20903s0204 10.0kb downstream 10.0kb downstream 10000 false Scaffold20903: 916366-926365 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365948 5261 Brassicaceae View MSA
123837359 5264 Brassicales-Malvales View MSA
124322295 5266 SBM View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain