Gene : Bostr.21554s0003 B. stricta v1.2
Defline:  (1 of 1) KOG0964//KOG0978 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  3
Name:  ? Bostr.21554s0003 Secondary Identifier:  ? PAC:30659089
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.21554s0003 0.5kb upstream 0.5kb upstream 5640 true Scaffold21554: 37316-42955 Boechera stricta
Bostr.21554s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold21554: 42456-42955 Boechera stricta
Bostr.21554s0003 0.5kb downstream 0.5kb downstream 5640 true Scaffold21554: 36816-42455 Boechera stricta
Bostr.21554s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold21554: 36816-37315 Boechera stricta
Bostr.21554s0003 1.0kb upstream 1.0kb upstream 6140 true Scaffold21554: 37316-43455 Boechera stricta
Bostr.21554s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold21554: 42456-43455 Boechera stricta
Bostr.21554s0003 1.0kb downstream 1.0kb downstream 6140 true Scaffold21554: 36316-42455 Boechera stricta
Bostr.21554s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold21554: 36316-37315 Boechera stricta
Bostr.21554s0003 2.0kb upstream 2.0kb upstream 7140 true Scaffold21554: 37316-44455 Boechera stricta
Bostr.21554s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold21554: 42456-44455 Boechera stricta
Bostr.21554s0003 2.0kb downstream 2.0kb downstream 7140 true Scaffold21554: 35316-42455 Boechera stricta
Bostr.21554s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold21554: 35316-37315 Boechera stricta
Bostr.21554s0003 5.0kb upstream 5.0kb upstream 10140 true Scaffold21554: 37316-47455 Boechera stricta
Bostr.21554s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold21554: 42456-47455 Boechera stricta
Bostr.21554s0003 5.0kb downstream 5.0kb downstream 10140 true Scaffold21554: 32316-42455 Boechera stricta
Bostr.21554s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold21554: 32316-37315 Boechera stricta
Bostr.21554s0003 10.0kb upstream 10.0kb upstream 15140 true Scaffold21554: 37316-52455 Boechera stricta
Bostr.21554s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold21554: 42456-52455 Boechera stricta
Bostr.21554s0003 10.0kb downstream 10.0kb downstream 15140 true Scaffold21554: 27316-42455 Boechera stricta
Bostr.21554s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold21554: 27316-37315 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363577 5261 Brassicaceae View MSA
123798568 5264 Brassicales-Malvales View MSA
124296187 5266 SBM View MSA
124148412 5268 Malvidae View MSA
123874410 5270 Rosid View MSA
123751003 5271 Pentapetalae View MSA
122791689 5272 Eudicot View MSA
122044031 5273 Angiosperm View MSA
121351485 5274 Embryophyte View MSA
123382184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain