Gene : Bostr.20903s0116 B. stricta v1.2
Defline:  (1 of 5) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  116
Name:  ? Bostr.20903s0116 Secondary Identifier:  ? PAC:30668863
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20903s0116 0.5kb upstream 0.5kb upstream 3632 true Scaffold20903: 522095-525726 Boechera stricta
Bostr.20903s0116 0.5kb upstream 0.5kb upstream 500 false Scaffold20903: 525227-525726 Boechera stricta
Bostr.20903s0116 0.5kb downstream 0.5kb downstream 3632 true Scaffold20903: 521595-525226 Boechera stricta
Bostr.20903s0116 0.5kb downstream 0.5kb downstream 500 false Scaffold20903: 521595-522094 Boechera stricta
Bostr.20903s0116 1.0kb upstream 1.0kb upstream 4132 true Scaffold20903: 522095-526226 Boechera stricta
Bostr.20903s0116 1.0kb upstream 1.0kb upstream 1000 false Scaffold20903: 525227-526226 Boechera stricta
Bostr.20903s0116 1.0kb downstream 1.0kb downstream 4132 true Scaffold20903: 521095-525226 Boechera stricta
Bostr.20903s0116 1.0kb downstream 1.0kb downstream 1000 false Scaffold20903: 521095-522094 Boechera stricta
Bostr.20903s0116 2.0kb upstream 2.0kb upstream 5132 true Scaffold20903: 522095-527226 Boechera stricta
Bostr.20903s0116 2.0kb upstream 2.0kb upstream 2000 false Scaffold20903: 525227-527226 Boechera stricta
Bostr.20903s0116 2.0kb downstream 2.0kb downstream 5132 true Scaffold20903: 520095-525226 Boechera stricta
Bostr.20903s0116 2.0kb downstream 2.0kb downstream 2000 false Scaffold20903: 520095-522094 Boechera stricta
Bostr.20903s0116 5.0kb upstream 5.0kb upstream 8132 true Scaffold20903: 522095-530226 Boechera stricta
Bostr.20903s0116 5.0kb upstream 5.0kb upstream 5000 false Scaffold20903: 525227-530226 Boechera stricta
Bostr.20903s0116 5.0kb downstream 5.0kb downstream 8132 true Scaffold20903: 517095-525226 Boechera stricta
Bostr.20903s0116 5.0kb downstream 5.0kb downstream 5000 false Scaffold20903: 517095-522094 Boechera stricta
Bostr.20903s0116 10.0kb upstream 10.0kb upstream 13132 true Scaffold20903: 522095-535226 Boechera stricta
Bostr.20903s0116 10.0kb upstream 10.0kb upstream 10000 false Scaffold20903: 525227-535226 Boechera stricta
Bostr.20903s0116 10.0kb downstream 10.0kb downstream 13132 true Scaffold20903: 512095-525226 Boechera stricta
Bostr.20903s0116 10.0kb downstream 10.0kb downstream 10000 false Scaffold20903: 512095-522094 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373975 5261 Brassicaceae View MSA
123836656 5264 Brassicales-Malvales View MSA
124345629 5266 SBM View MSA
124251480 5268 Malvidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain