Gene : Bostr.20903s0115 B. stricta v1.2
Defline:  (1 of 5) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  115
Name:  ? Bostr.20903s0115 Secondary Identifier:  ? PAC:30668902
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20903s0115 0.5kb upstream 0.5kb upstream 3457 true Scaffold20903: 518342-521798 Boechera stricta
Bostr.20903s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold20903: 521299-521798 Boechera stricta
Bostr.20903s0115 0.5kb downstream 0.5kb downstream 3457 true Scaffold20903: 517842-521298 Boechera stricta
Bostr.20903s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold20903: 517842-518341 Boechera stricta
Bostr.20903s0115 1.0kb upstream 1.0kb upstream 3957 true Scaffold20903: 518342-522298 Boechera stricta
Bostr.20903s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold20903: 521299-522298 Boechera stricta
Bostr.20903s0115 1.0kb downstream 1.0kb downstream 3957 true Scaffold20903: 517342-521298 Boechera stricta
Bostr.20903s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold20903: 517342-518341 Boechera stricta
Bostr.20903s0115 2.0kb upstream 2.0kb upstream 4957 true Scaffold20903: 518342-523298 Boechera stricta
Bostr.20903s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold20903: 521299-523298 Boechera stricta
Bostr.20903s0115 2.0kb downstream 2.0kb downstream 4957 true Scaffold20903: 516342-521298 Boechera stricta
Bostr.20903s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold20903: 516342-518341 Boechera stricta
Bostr.20903s0115 5.0kb upstream 5.0kb upstream 7957 true Scaffold20903: 518342-526298 Boechera stricta
Bostr.20903s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold20903: 521299-526298 Boechera stricta
Bostr.20903s0115 5.0kb downstream 5.0kb downstream 7957 true Scaffold20903: 513342-521298 Boechera stricta
Bostr.20903s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold20903: 513342-518341 Boechera stricta
Bostr.20903s0115 10.0kb upstream 10.0kb upstream 12957 true Scaffold20903: 518342-531298 Boechera stricta
Bostr.20903s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold20903: 521299-531298 Boechera stricta
Bostr.20903s0115 10.0kb downstream 10.0kb downstream 12957 true Scaffold20903: 508342-521298 Boechera stricta
Bostr.20903s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold20903: 508342-518341 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502686 5273 Angiosperm View MSA
122343382 5261 Brassicaceae View MSA
123783602 5264 Brassicales-Malvales View MSA
124281824 5266 SBM View MSA
124136511 5268 Malvidae View MSA
123864362 5270 Rosid View MSA
123449679 5271 Pentapetalae View MSA
122485209 5272 Eudicot View MSA
120775993 5274 Embryophyte View MSA
122818280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain