Gene : Bostr.20903s0056 B. stricta v1.2
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  56
Name:  ? Bostr.20903s0056 Secondary Identifier:  ? PAC:30668857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20903s0056 0.5kb upstream 0.5kb upstream 3642 true Scaffold20903: 263174-266815 Boechera stricta
Bostr.20903s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold20903: 263174-263673 Boechera stricta
Bostr.20903s0056 0.5kb downstream 0.5kb downstream 3642 true Scaffold20903: 263674-267315 Boechera stricta
Bostr.20903s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold20903: 266816-267315 Boechera stricta
Bostr.20903s0056 1.0kb upstream 1.0kb upstream 4142 true Scaffold20903: 262674-266815 Boechera stricta
Bostr.20903s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold20903: 262674-263673 Boechera stricta
Bostr.20903s0056 1.0kb downstream 1.0kb downstream 4142 true Scaffold20903: 263674-267815 Boechera stricta
Bostr.20903s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold20903: 266816-267815 Boechera stricta
Bostr.20903s0056 2.0kb upstream 2.0kb upstream 5142 true Scaffold20903: 261674-266815 Boechera stricta
Bostr.20903s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold20903: 261674-263673 Boechera stricta
Bostr.20903s0056 2.0kb downstream 2.0kb downstream 5142 true Scaffold20903: 263674-268815 Boechera stricta
Bostr.20903s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold20903: 266816-268815 Boechera stricta
Bostr.20903s0056 5.0kb upstream 5.0kb upstream 8142 true Scaffold20903: 258674-266815 Boechera stricta
Bostr.20903s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold20903: 258674-263673 Boechera stricta
Bostr.20903s0056 5.0kb downstream 5.0kb downstream 8142 true Scaffold20903: 263674-271815 Boechera stricta
Bostr.20903s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold20903: 266816-271815 Boechera stricta
Bostr.20903s0056 10.0kb upstream 10.0kb upstream 13142 true Scaffold20903: 253674-266815 Boechera stricta
Bostr.20903s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold20903: 253674-263673 Boechera stricta
Bostr.20903s0056 10.0kb downstream 10.0kb downstream 13142 true Scaffold20903: 263674-276815 Boechera stricta
Bostr.20903s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold20903: 266816-276815 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370268 5261 Brassicaceae View MSA
123840552 5264 Brassicales-Malvales View MSA
124344674 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain