Gene : Bostr.20505s0098 B. stricta v1.2
Defline:  (1 of 2) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  98
Name:  ? Bostr.20505s0098 Secondary Identifier:  ? PAC:30674534
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20505s0098 0.5kb upstream 0.5kb upstream 2788 true Scaffold20505: 446061-448848 Boechera stricta
Bostr.20505s0098 0.5kb upstream 0.5kb upstream 500 false Scaffold20505: 448349-448848 Boechera stricta
Bostr.20505s0098 0.5kb downstream 0.5kb downstream 2788 true Scaffold20505: 445561-448348 Boechera stricta
Bostr.20505s0098 0.5kb downstream 0.5kb downstream 500 false Scaffold20505: 445561-446060 Boechera stricta
Bostr.20505s0098 1.0kb upstream 1.0kb upstream 3288 true Scaffold20505: 446061-449348 Boechera stricta
Bostr.20505s0098 1.0kb upstream 1.0kb upstream 1000 false Scaffold20505: 448349-449348 Boechera stricta
Bostr.20505s0098 1.0kb downstream 1.0kb downstream 3288 true Scaffold20505: 445061-448348 Boechera stricta
Bostr.20505s0098 1.0kb downstream 1.0kb downstream 1000 false Scaffold20505: 445061-446060 Boechera stricta
Bostr.20505s0098 2.0kb upstream 2.0kb upstream 4288 true Scaffold20505: 446061-450348 Boechera stricta
Bostr.20505s0098 2.0kb upstream 2.0kb upstream 2000 false Scaffold20505: 448349-450348 Boechera stricta
Bostr.20505s0098 2.0kb downstream 2.0kb downstream 4288 true Scaffold20505: 444061-448348 Boechera stricta
Bostr.20505s0098 2.0kb downstream 2.0kb downstream 2000 false Scaffold20505: 444061-446060 Boechera stricta
Bostr.20505s0098 5.0kb upstream 5.0kb upstream 7288 true Scaffold20505: 446061-453348 Boechera stricta
Bostr.20505s0098 5.0kb upstream 5.0kb upstream 5000 false Scaffold20505: 448349-453348 Boechera stricta
Bostr.20505s0098 5.0kb downstream 5.0kb downstream 7288 true Scaffold20505: 441061-448348 Boechera stricta
Bostr.20505s0098 5.0kb downstream 5.0kb downstream 5000 false Scaffold20505: 441061-446060 Boechera stricta
Bostr.20505s0098 10.0kb upstream 10.0kb upstream 12288 true Scaffold20505: 446061-458348 Boechera stricta
Bostr.20505s0098 10.0kb upstream 10.0kb upstream 10000 false Scaffold20505: 448349-458348 Boechera stricta
Bostr.20505s0098 10.0kb downstream 10.0kb downstream 12288 true Scaffold20505: 436061-448348 Boechera stricta
Bostr.20505s0098 10.0kb downstream 10.0kb downstream 10000 false Scaffold20505: 436061-446060 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510946 5273 Angiosperm View MSA
122370194 5261 Brassicaceae View MSA
123799914 5264 Brassicales-Malvales View MSA
124297384 5266 SBM View MSA
124149293 5268 Malvidae View MSA
123875128 5270 Rosid View MSA
123459003 5271 Pentapetalae View MSA
122494399 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain