Gene : Bostr.20505s0150 B. stricta v1.2

Defline:  (1 of 1) PTHR11952:SF8 - UDP-GLUCOSE PYROPHOSPHORYLASE 3 Genomic Order:  150
Name:  ? Bostr.20505s0150 Secondary Identifier:  ? PAC:30674562

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3801 Boechera stricta pathologic  
Bstricta PWY-6527 Boechera stricta pathologic  
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta PWY-7343 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.20505s0150 0.5kb upstream 0.5kb upstream 5781 true Scaffold20505: 641579-647359 Boechera stricta
Bostr.20505s0150 0.5kb upstream 0.5kb upstream 500 false Scaffold20505: 641579-642078 Boechera stricta
Bostr.20505s0150 0.5kb downstream 0.5kb downstream 5781 true Scaffold20505: 642079-647859 Boechera stricta
Bostr.20505s0150 0.5kb downstream 0.5kb downstream 500 false Scaffold20505: 647360-647859 Boechera stricta
Bostr.20505s0150 1.0kb upstream 1.0kb upstream 6281 true Scaffold20505: 641079-647359 Boechera stricta
Bostr.20505s0150 1.0kb upstream 1.0kb upstream 1000 false Scaffold20505: 641079-642078 Boechera stricta
Bostr.20505s0150 1.0kb downstream 1.0kb downstream 6281 true Scaffold20505: 642079-648359 Boechera stricta
Bostr.20505s0150 1.0kb downstream 1.0kb downstream 1000 false Scaffold20505: 647360-648359 Boechera stricta
Bostr.20505s0150 2.0kb upstream 2.0kb upstream 7281 true Scaffold20505: 640079-647359 Boechera stricta
Bostr.20505s0150 2.0kb upstream 2.0kb upstream 2000 false Scaffold20505: 640079-642078 Boechera stricta
Bostr.20505s0150 2.0kb downstream 2.0kb downstream 7281 true Scaffold20505: 642079-649359 Boechera stricta
Bostr.20505s0150 2.0kb downstream 2.0kb downstream 2000 false Scaffold20505: 647360-649359 Boechera stricta
Bostr.20505s0150 5.0kb upstream 5.0kb upstream 10281 true Scaffold20505: 637079-647359 Boechera stricta
Bostr.20505s0150 5.0kb upstream 5.0kb upstream 5000 false Scaffold20505: 637079-642078 Boechera stricta
Bostr.20505s0150 5.0kb downstream 5.0kb downstream 10281 true Scaffold20505: 642079-652359 Boechera stricta
Bostr.20505s0150 5.0kb downstream 5.0kb downstream 5000 false Scaffold20505: 647360-652359 Boechera stricta
Bostr.20505s0150 10.0kb upstream 10.0kb upstream 15281 true Scaffold20505: 632079-647359 Boechera stricta
Bostr.20505s0150 10.0kb upstream 10.0kb upstream 10000 false Scaffold20505: 632079-642078 Boechera stricta
Bostr.20505s0150 10.0kb downstream 10.0kb downstream 15281 true Scaffold20505: 642079-657359 Boechera stricta
Bostr.20505s0150 10.0kb downstream 10.0kb downstream 10000 false Scaffold20505: 647360-657359 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365164 5261 Brassicaceae View MSA
123830376 5264 Brassicales-Malvales View MSA
124341455 5266 SBM View MSA
124239983 5268 Malvidae View MSA
124063729 5270 Rosid View MSA
123739193 5271 Pentapetalae View MSA
122788288 5272 Eudicot View MSA
122041983 5273 Angiosperm View MSA
121345707 5274 Embryophyte View MSA
123424672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain