Gene : Bostr.23794s0511 B. stricta v1.2

Defline:  (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Genomic Order:  511
Name:  ? Bostr.23794s0511 Secondary Identifier:  ? PAC:30651065

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7238 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0511 0.5kb upstream 0.5kb upstream 3197 true Scaffold23794: 3009918-3013114 Boechera stricta
Bostr.23794s0511 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 3012615-3013114 Boechera stricta
Bostr.23794s0511 0.5kb downstream 0.5kb downstream 3197 true Scaffold23794: 3009418-3012614 Boechera stricta
Bostr.23794s0511 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 3009418-3009917 Boechera stricta
Bostr.23794s0511 1.0kb upstream 1.0kb upstream 3697 true Scaffold23794: 3009918-3013614 Boechera stricta
Bostr.23794s0511 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 3012615-3013614 Boechera stricta
Bostr.23794s0511 1.0kb downstream 1.0kb downstream 3697 true Scaffold23794: 3008918-3012614 Boechera stricta
Bostr.23794s0511 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 3008918-3009917 Boechera stricta
Bostr.23794s0511 2.0kb upstream 2.0kb upstream 4697 true Scaffold23794: 3009918-3014614 Boechera stricta
Bostr.23794s0511 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 3012615-3014614 Boechera stricta
Bostr.23794s0511 2.0kb downstream 2.0kb downstream 4697 true Scaffold23794: 3007918-3012614 Boechera stricta
Bostr.23794s0511 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 3007918-3009917 Boechera stricta
Bostr.23794s0511 5.0kb upstream 5.0kb upstream 7697 true Scaffold23794: 3009918-3017614 Boechera stricta
Bostr.23794s0511 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 3012615-3017614 Boechera stricta
Bostr.23794s0511 5.0kb downstream 5.0kb downstream 7697 true Scaffold23794: 3004918-3012614 Boechera stricta
Bostr.23794s0511 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 3004918-3009917 Boechera stricta
Bostr.23794s0511 10.0kb upstream 10.0kb upstream 12697 true Scaffold23794: 3009918-3022614 Boechera stricta
Bostr.23794s0511 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 3012615-3022614 Boechera stricta
Bostr.23794s0511 10.0kb downstream 10.0kb downstream 12697 true Scaffold23794: 2999918-3012614 Boechera stricta
Bostr.23794s0511 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 2999918-3009917 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363524 5261 Brassicaceae View MSA
123834610 5264 Brassicales-Malvales View MSA
124339370 5266 SBM View MSA
124250710 5268 Malvidae View MSA
124067868 5270 Rosid View MSA
123748054 5271 Pentapetalae View MSA
122788536 5272 Eudicot View MSA
122041652 5273 Angiosperm View MSA
123428930 5275 Viridiplantae View MSA
121349182 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain