Gene : Bostr.23794s0545 B. stricta v1.2

Defline:  (1 of 8) PTHR11461 - SERINE PROTEASE INHIBITOR, SERPIN Genomic Order:  545
Name:  ? Bostr.23794s0545 Secondary Identifier:  ? PAC:30650933

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0545 0.5kb upstream 0.5kb upstream 1611 true Scaffold23794: 3164188-3165798 Boechera stricta
Bostr.23794s0545 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 3164188-3164687 Boechera stricta
Bostr.23794s0545 0.5kb downstream 0.5kb downstream 1611 true Scaffold23794: 3164688-3166298 Boechera stricta
Bostr.23794s0545 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 3165799-3166298 Boechera stricta
Bostr.23794s0545 1.0kb upstream 1.0kb upstream 2111 true Scaffold23794: 3163688-3165798 Boechera stricta
Bostr.23794s0545 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 3163688-3164687 Boechera stricta
Bostr.23794s0545 1.0kb downstream 1.0kb downstream 2111 true Scaffold23794: 3164688-3166798 Boechera stricta
Bostr.23794s0545 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 3165799-3166798 Boechera stricta
Bostr.23794s0545 2.0kb upstream 2.0kb upstream 3111 true Scaffold23794: 3162688-3165798 Boechera stricta
Bostr.23794s0545 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 3162688-3164687 Boechera stricta
Bostr.23794s0545 2.0kb downstream 2.0kb downstream 3111 true Scaffold23794: 3164688-3167798 Boechera stricta
Bostr.23794s0545 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 3165799-3167798 Boechera stricta
Bostr.23794s0545 5.0kb upstream 5.0kb upstream 6111 true Scaffold23794: 3159688-3165798 Boechera stricta
Bostr.23794s0545 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 3159688-3164687 Boechera stricta
Bostr.23794s0545 5.0kb downstream 5.0kb downstream 6111 true Scaffold23794: 3164688-3170798 Boechera stricta
Bostr.23794s0545 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 3165799-3170798 Boechera stricta
Bostr.23794s0545 10.0kb upstream 10.0kb upstream 11111 true Scaffold23794: 3154688-3165798 Boechera stricta
Bostr.23794s0545 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 3154688-3164687 Boechera stricta
Bostr.23794s0545 10.0kb downstream 10.0kb downstream 11111 true Scaffold23794: 3164688-3175798 Boechera stricta
Bostr.23794s0545 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 3165799-3175798 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027961 5273 Angiosperm View MSA
122338997 5261 Brassicaceae Singleton cluster - no MSA
123779514 5264 Brassicales-Malvales Singleton cluster - no MSA
124277835 5266 SBM Singleton cluster - no MSA
124132996 5268 Malvidae Singleton cluster - no MSA
124039920 5270 Rosid View MSA
123744288 5271 Pentapetalae View MSA
122797560 5272 Eudicot View MSA
121297526 5274 Embryophyte View MSA
123335573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain