Gene : Bostr.23794s0554 B. stricta v1.2

Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  554
Name:  ? Bostr.23794s0554 Secondary Identifier:  ? PAC:30650815

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0554 0.5kb upstream 0.5kb upstream 2211 true Scaffold23794: 3192045-3194255 Boechera stricta
Bostr.23794s0554 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 3192045-3192544 Boechera stricta
Bostr.23794s0554 0.5kb downstream 0.5kb downstream 2211 true Scaffold23794: 3192545-3194755 Boechera stricta
Bostr.23794s0554 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 3194256-3194755 Boechera stricta
Bostr.23794s0554 1.0kb upstream 1.0kb upstream 2711 true Scaffold23794: 3191545-3194255 Boechera stricta
Bostr.23794s0554 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 3191545-3192544 Boechera stricta
Bostr.23794s0554 1.0kb downstream 1.0kb downstream 2711 true Scaffold23794: 3192545-3195255 Boechera stricta
Bostr.23794s0554 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 3194256-3195255 Boechera stricta
Bostr.23794s0554 2.0kb upstream 2.0kb upstream 3711 true Scaffold23794: 3190545-3194255 Boechera stricta
Bostr.23794s0554 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 3190545-3192544 Boechera stricta
Bostr.23794s0554 2.0kb downstream 2.0kb downstream 3711 true Scaffold23794: 3192545-3196255 Boechera stricta
Bostr.23794s0554 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 3194256-3196255 Boechera stricta
Bostr.23794s0554 5.0kb upstream 5.0kb upstream 6711 true Scaffold23794: 3187545-3194255 Boechera stricta
Bostr.23794s0554 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 3187545-3192544 Boechera stricta
Bostr.23794s0554 5.0kb downstream 5.0kb downstream 6711 true Scaffold23794: 3192545-3199255 Boechera stricta
Bostr.23794s0554 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 3194256-3199255 Boechera stricta
Bostr.23794s0554 10.0kb upstream 10.0kb upstream 11711 true Scaffold23794: 3182545-3194255 Boechera stricta
Bostr.23794s0554 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 3182545-3192544 Boechera stricta
Bostr.23794s0554 10.0kb downstream 10.0kb downstream 11711 true Scaffold23794: 3192545-3204255 Boechera stricta
Bostr.23794s0554 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 3194256-3204255 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372392 5261 Brassicaceae View MSA
123831593 5264 Brassicales-Malvales View MSA
124344913 5266 SBM View MSA
124239199 5268 Malvidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain