Gene : Bostr.23794s0409 B. stricta v1.2
Defline:  (1 of 1) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Genomic Order:  409
Name:  ? Bostr.23794s0409 Secondary Identifier:  ? PAC:30651300
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6773 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0409 0.5kb upstream 0.5kb upstream 16525 true Scaffold23794: 2386316-2402840 Boechera stricta
Bostr.23794s0409 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 2386316-2386815 Boechera stricta
Bostr.23794s0409 0.5kb downstream 0.5kb downstream 16525 true Scaffold23794: 2386816-2403340 Boechera stricta
Bostr.23794s0409 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 2402841-2403340 Boechera stricta
Bostr.23794s0409 1.0kb upstream 1.0kb upstream 17025 true Scaffold23794: 2385816-2402840 Boechera stricta
Bostr.23794s0409 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 2385816-2386815 Boechera stricta
Bostr.23794s0409 1.0kb downstream 1.0kb downstream 17025 true Scaffold23794: 2386816-2403840 Boechera stricta
Bostr.23794s0409 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 2402841-2403840 Boechera stricta
Bostr.23794s0409 2.0kb upstream 2.0kb upstream 18025 true Scaffold23794: 2384816-2402840 Boechera stricta
Bostr.23794s0409 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 2384816-2386815 Boechera stricta
Bostr.23794s0409 2.0kb downstream 2.0kb downstream 18025 true Scaffold23794: 2386816-2404840 Boechera stricta
Bostr.23794s0409 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 2402841-2404840 Boechera stricta
Bostr.23794s0409 5.0kb upstream 5.0kb upstream 21025 true Scaffold23794: 2381816-2402840 Boechera stricta
Bostr.23794s0409 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 2381816-2386815 Boechera stricta
Bostr.23794s0409 5.0kb downstream 5.0kb downstream 21025 true Scaffold23794: 2386816-2407840 Boechera stricta
Bostr.23794s0409 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 2402841-2407840 Boechera stricta
Bostr.23794s0409 10.0kb upstream 10.0kb upstream 26025 true Scaffold23794: 2376816-2402840 Boechera stricta
Bostr.23794s0409 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 2376816-2386815 Boechera stricta
Bostr.23794s0409 10.0kb downstream 10.0kb downstream 26025 true Scaffold23794: 2386816-2412840 Boechera stricta
Bostr.23794s0409 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 2402841-2412840 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366913 5261 Brassicaceae View MSA
123828682 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain