Gene : Bostr.23794s0429 B. stricta v1.2

Defline:  (1 of 2) PTHR23241:SF11 - LATE EMBRYOGENESIS ABUNDANT PROTEIN (ATECP63)-RELATED Genomic Order:  429
Name:  ? Bostr.23794s0429 Secondary Identifier:  ? PAC:30651069

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0429 0.5kb upstream 0.5kb upstream 2326 true Scaffold23794: 2518859-2521184 Boechera stricta
Bostr.23794s0429 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 2518859-2519358 Boechera stricta
Bostr.23794s0429 0.5kb downstream 0.5kb downstream 2326 true Scaffold23794: 2519359-2521684 Boechera stricta
Bostr.23794s0429 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 2521185-2521684 Boechera stricta
Bostr.23794s0429 1.0kb upstream 1.0kb upstream 2826 true Scaffold23794: 2518359-2521184 Boechera stricta
Bostr.23794s0429 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 2518359-2519358 Boechera stricta
Bostr.23794s0429 1.0kb downstream 1.0kb downstream 2826 true Scaffold23794: 2519359-2522184 Boechera stricta
Bostr.23794s0429 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 2521185-2522184 Boechera stricta
Bostr.23794s0429 2.0kb upstream 2.0kb upstream 3826 true Scaffold23794: 2517359-2521184 Boechera stricta
Bostr.23794s0429 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 2517359-2519358 Boechera stricta
Bostr.23794s0429 2.0kb downstream 2.0kb downstream 3826 true Scaffold23794: 2519359-2523184 Boechera stricta
Bostr.23794s0429 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 2521185-2523184 Boechera stricta
Bostr.23794s0429 5.0kb upstream 5.0kb upstream 6826 true Scaffold23794: 2514359-2521184 Boechera stricta
Bostr.23794s0429 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 2514359-2519358 Boechera stricta
Bostr.23794s0429 5.0kb downstream 5.0kb downstream 6826 true Scaffold23794: 2519359-2526184 Boechera stricta
Bostr.23794s0429 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 2521185-2526184 Boechera stricta
Bostr.23794s0429 10.0kb upstream 10.0kb upstream 11826 true Scaffold23794: 2509359-2521184 Boechera stricta
Bostr.23794s0429 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 2509359-2519358 Boechera stricta
Bostr.23794s0429 10.0kb downstream 10.0kb downstream 11826 true Scaffold23794: 2519359-2531184 Boechera stricta
Bostr.23794s0429 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 2521185-2531184 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377278 5261 Brassicaceae View MSA
123838811 5264 Brassicales-Malvales View MSA
124341968 5266 SBM View MSA
124253564 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain