Gene : Bostr.23794s0306 B. stricta v1.2
Defline:  (1 of 1) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  306
Name:  ? Bostr.23794s0306 Secondary Identifier:  ? PAC:30650830
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6124 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0306 0.5kb upstream 0.5kb upstream 5736 true Scaffold23794: 1711857-1717592 Boechera stricta
Bostr.23794s0306 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 1717093-1717592 Boechera stricta
Bostr.23794s0306 0.5kb downstream 0.5kb downstream 5736 true Scaffold23794: 1711357-1717092 Boechera stricta
Bostr.23794s0306 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 1711357-1711856 Boechera stricta
Bostr.23794s0306 1.0kb upstream 1.0kb upstream 6236 true Scaffold23794: 1711857-1718092 Boechera stricta
Bostr.23794s0306 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 1717093-1718092 Boechera stricta
Bostr.23794s0306 1.0kb downstream 1.0kb downstream 6236 true Scaffold23794: 1710857-1717092 Boechera stricta
Bostr.23794s0306 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 1710857-1711856 Boechera stricta
Bostr.23794s0306 2.0kb upstream 2.0kb upstream 7236 true Scaffold23794: 1711857-1719092 Boechera stricta
Bostr.23794s0306 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 1717093-1719092 Boechera stricta
Bostr.23794s0306 2.0kb downstream 2.0kb downstream 7236 true Scaffold23794: 1709857-1717092 Boechera stricta
Bostr.23794s0306 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 1709857-1711856 Boechera stricta
Bostr.23794s0306 5.0kb upstream 5.0kb upstream 10236 true Scaffold23794: 1711857-1722092 Boechera stricta
Bostr.23794s0306 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 1717093-1722092 Boechera stricta
Bostr.23794s0306 5.0kb downstream 5.0kb downstream 10236 true Scaffold23794: 1706857-1717092 Boechera stricta
Bostr.23794s0306 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 1706857-1711856 Boechera stricta
Bostr.23794s0306 10.0kb upstream 10.0kb upstream 15236 true Scaffold23794: 1711857-1727092 Boechera stricta
Bostr.23794s0306 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 1717093-1727092 Boechera stricta
Bostr.23794s0306 10.0kb downstream 10.0kb downstream 15236 true Scaffold23794: 1701857-1717092 Boechera stricta
Bostr.23794s0306 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 1701857-1711856 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374087 5261 Brassicaceae View MSA
123828913 5264 Brassicales-Malvales View MSA
124337845 5266 SBM View MSA
124251478 5268 Malvidae View MSA
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain