Gene : Bostr.23794s0212 B. stricta v1.2

Defline:  (1 of 3) K03145 - transcription elongation factor S-II (TFIIS) Genomic Order:  212
Name:  ? Bostr.23794s0212 Secondary Identifier:  ? PAC:30651476

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0212 0.5kb upstream 0.5kb upstream 4530 true Scaffold23794: 1157779-1162308 Boechera stricta
Bostr.23794s0212 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 1161809-1162308 Boechera stricta
Bostr.23794s0212 0.5kb downstream 0.5kb downstream 4530 true Scaffold23794: 1157279-1161808 Boechera stricta
Bostr.23794s0212 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 1157279-1157778 Boechera stricta
Bostr.23794s0212 1.0kb upstream 1.0kb upstream 5030 true Scaffold23794: 1157779-1162808 Boechera stricta
Bostr.23794s0212 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 1161809-1162808 Boechera stricta
Bostr.23794s0212 1.0kb downstream 1.0kb downstream 5030 true Scaffold23794: 1156779-1161808 Boechera stricta
Bostr.23794s0212 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 1156779-1157778 Boechera stricta
Bostr.23794s0212 2.0kb upstream 2.0kb upstream 6030 true Scaffold23794: 1157779-1163808 Boechera stricta
Bostr.23794s0212 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 1161809-1163808 Boechera stricta
Bostr.23794s0212 2.0kb downstream 2.0kb downstream 6030 true Scaffold23794: 1155779-1161808 Boechera stricta
Bostr.23794s0212 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 1155779-1157778 Boechera stricta
Bostr.23794s0212 5.0kb upstream 5.0kb upstream 9030 true Scaffold23794: 1157779-1166808 Boechera stricta
Bostr.23794s0212 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 1161809-1166808 Boechera stricta
Bostr.23794s0212 5.0kb downstream 5.0kb downstream 9030 true Scaffold23794: 1152779-1161808 Boechera stricta
Bostr.23794s0212 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 1152779-1157778 Boechera stricta
Bostr.23794s0212 10.0kb upstream 10.0kb upstream 14030 true Scaffold23794: 1157779-1171808 Boechera stricta
Bostr.23794s0212 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 1161809-1171808 Boechera stricta
Bostr.23794s0212 10.0kb downstream 10.0kb downstream 14030 true Scaffold23794: 1147779-1161808 Boechera stricta
Bostr.23794s0212 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 1147779-1157778 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362149 5261 Brassicaceae View MSA
123828905 5264 Brassicales-Malvales View MSA
124344967 5266 SBM View MSA
124242290 5268 Malvidae View MSA
124069018 5270 Rosid View MSA
123737080 5271 Pentapetalae View MSA
122788816 5272 Eudicot View MSA
122046561 5273 Angiosperm View MSA
121310623 5274 Embryophyte View MSA
123348060 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain