Gene : Bostr.23794s0166 B. stricta v1.2
Defline:  (1 of 1) PTHR31235:SF43 - PEROXIDASE 24 Genomic Order:  166
Name:  ? Bostr.23794s0166 Secondary Identifier:  ? PAC:30651266
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0166 0.5kb upstream 0.5kb upstream 2405 true Scaffold23794: 918870-921274 Boechera stricta
Bostr.23794s0166 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 918870-919369 Boechera stricta
Bostr.23794s0166 0.5kb downstream 0.5kb downstream 2405 true Scaffold23794: 919370-921774 Boechera stricta
Bostr.23794s0166 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 921275-921774 Boechera stricta
Bostr.23794s0166 1.0kb upstream 1.0kb upstream 2905 true Scaffold23794: 918370-921274 Boechera stricta
Bostr.23794s0166 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 918370-919369 Boechera stricta
Bostr.23794s0166 1.0kb downstream 1.0kb downstream 2905 true Scaffold23794: 919370-922274 Boechera stricta
Bostr.23794s0166 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 921275-922274 Boechera stricta
Bostr.23794s0166 2.0kb upstream 2.0kb upstream 3905 true Scaffold23794: 917370-921274 Boechera stricta
Bostr.23794s0166 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 917370-919369 Boechera stricta
Bostr.23794s0166 2.0kb downstream 2.0kb downstream 3905 true Scaffold23794: 919370-923274 Boechera stricta
Bostr.23794s0166 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 921275-923274 Boechera stricta
Bostr.23794s0166 5.0kb upstream 5.0kb upstream 6905 true Scaffold23794: 914370-921274 Boechera stricta
Bostr.23794s0166 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 914370-919369 Boechera stricta
Bostr.23794s0166 5.0kb downstream 5.0kb downstream 6905 true Scaffold23794: 919370-926274 Boechera stricta
Bostr.23794s0166 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 921275-926274 Boechera stricta
Bostr.23794s0166 10.0kb upstream 10.0kb upstream 11905 true Scaffold23794: 909370-921274 Boechera stricta
Bostr.23794s0166 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 909370-919369 Boechera stricta
Bostr.23794s0166 10.0kb downstream 10.0kb downstream 11905 true Scaffold23794: 919370-931274 Boechera stricta
Bostr.23794s0166 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 921275-931274 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366131 5261 Brassicaceae View MSA
123832481 5264 Brassicales-Malvales View MSA
124338577 5266 SBM View MSA
124247065 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain