Gene : Bostr.23794s0178 B. stricta v1.2

Defline:  (1 of 1) PTHR24349:SF81 - CALCIUM-DEPENDENT PROTEIN KINASE 20 Genomic Order:  178
Name:  ? Bostr.23794s0178 Secondary Identifier:  ? PAC:30651096

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0178 0.5kb upstream 0.5kb upstream 2847 true Scaffold23794: 1025307-1028153 Boechera stricta
Bostr.23794s0178 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 1025307-1025806 Boechera stricta
Bostr.23794s0178 0.5kb downstream 0.5kb downstream 2847 true Scaffold23794: 1025807-1028653 Boechera stricta
Bostr.23794s0178 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 1028154-1028653 Boechera stricta
Bostr.23794s0178 1.0kb upstream 1.0kb upstream 3347 true Scaffold23794: 1024807-1028153 Boechera stricta
Bostr.23794s0178 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 1024807-1025806 Boechera stricta
Bostr.23794s0178 1.0kb downstream 1.0kb downstream 3347 true Scaffold23794: 1025807-1029153 Boechera stricta
Bostr.23794s0178 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 1028154-1029153 Boechera stricta
Bostr.23794s0178 2.0kb upstream 2.0kb upstream 4347 true Scaffold23794: 1023807-1028153 Boechera stricta
Bostr.23794s0178 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 1023807-1025806 Boechera stricta
Bostr.23794s0178 2.0kb downstream 2.0kb downstream 4347 true Scaffold23794: 1025807-1030153 Boechera stricta
Bostr.23794s0178 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 1028154-1030153 Boechera stricta
Bostr.23794s0178 5.0kb upstream 5.0kb upstream 7347 true Scaffold23794: 1020807-1028153 Boechera stricta
Bostr.23794s0178 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 1020807-1025806 Boechera stricta
Bostr.23794s0178 5.0kb downstream 5.0kb downstream 7347 true Scaffold23794: 1025807-1033153 Boechera stricta
Bostr.23794s0178 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 1028154-1033153 Boechera stricta
Bostr.23794s0178 10.0kb upstream 10.0kb upstream 12347 true Scaffold23794: 1015807-1028153 Boechera stricta
Bostr.23794s0178 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 1015807-1025806 Boechera stricta
Bostr.23794s0178 10.0kb downstream 10.0kb downstream 12347 true Scaffold23794: 1025807-1038153 Boechera stricta
Bostr.23794s0178 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 1028154-1038153 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370911 5261 Brassicaceae View MSA
123834967 5264 Brassicales-Malvales View MSA
124346326 5266 SBM View MSA
124238266 5268 Malvidae View MSA
124067641 5270 Rosid View MSA
123746837 5271 Pentapetalae View MSA
122788348 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain