Gene : Bostr.23794s0005 B. stricta v1.2

Defline:  (1 of 3) PTHR23092:SF30 - NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  5
Name:  ? Bostr.23794s0005 Secondary Identifier:  ? PAC:30650764

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.23794s0005 0.5kb upstream 0.5kb upstream 4421 true Scaffold23794: 12853-17273 Boechera stricta
Bostr.23794s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold23794: 12853-13352 Boechera stricta
Bostr.23794s0005 0.5kb downstream 0.5kb downstream 4421 true Scaffold23794: 13353-17773 Boechera stricta
Bostr.23794s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold23794: 17274-17773 Boechera stricta
Bostr.23794s0005 1.0kb upstream 1.0kb upstream 4921 true Scaffold23794: 12353-17273 Boechera stricta
Bostr.23794s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold23794: 12353-13352 Boechera stricta
Bostr.23794s0005 1.0kb downstream 1.0kb downstream 4921 true Scaffold23794: 13353-18273 Boechera stricta
Bostr.23794s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold23794: 17274-18273 Boechera stricta
Bostr.23794s0005 2.0kb upstream 2.0kb upstream 5921 true Scaffold23794: 11353-17273 Boechera stricta
Bostr.23794s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold23794: 11353-13352 Boechera stricta
Bostr.23794s0005 2.0kb downstream 2.0kb downstream 5921 true Scaffold23794: 13353-19273 Boechera stricta
Bostr.23794s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold23794: 17274-19273 Boechera stricta
Bostr.23794s0005 5.0kb upstream 5.0kb upstream 8921 true Scaffold23794: 8353-17273 Boechera stricta
Bostr.23794s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold23794: 8353-13352 Boechera stricta
Bostr.23794s0005 5.0kb downstream 5.0kb downstream 8921 true Scaffold23794: 13353-22273 Boechera stricta
Bostr.23794s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold23794: 17274-22273 Boechera stricta
Bostr.23794s0005 10.0kb upstream 10.0kb upstream 13921 true Scaffold23794: 3353-17273 Boechera stricta
Bostr.23794s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold23794: 3353-13352 Boechera stricta
Bostr.23794s0005 10.0kb downstream 10.0kb downstream 13921 true Scaffold23794: 13353-27273 Boechera stricta
Bostr.23794s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold23794: 17274-27273 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372567 5261 Brassicaceae View MSA
123800388 5264 Brassicales-Malvales View MSA
124297804 5266 SBM View MSA
124251652 5268 Malvidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain